RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 C21orf2O43822 256 aa22.69■■□□□ 1.22
CHKB-209ENST00000481673 SNHG28P0DPA3 235 aa22.69■■□□□ 1.22
CHKB-209ENST00000481673 ATP2B1P20020 1258 aa22.69■■□□□ 1.22
CHKB-209ENST00000481673 SHMT1P34896 483 aa22.69■■□□□ 1.22
CHKB-209ENST00000481673 ARL6IP4Q66PJ3 421 aaKnown RBP22.69■■□□□ 1.22
CHKB-209ENST00000481673 SARM1Q6SZW1 724 aa22.69■■□□□ 1.22
CHKB-209ENST00000481673 ENTPD3O75355 529 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 AKR1B1P15121 316 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 ATP2C1P98194 919 aaPredicted RBP22.68■■□□□ 1.22
CHKB-209ENST00000481673 PIK3AP1Q6ZUJ8 805 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 ZMYND12Q9H0C1 365 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 RIOX1Q9H6W3 641 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 STXBP3O00186 592 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 PDHBP11177 359 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 NFIAQ12857 509 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 EARS2Q5JPH6 523 aaKnown RBP22.68■■□□□ 1.22
CHKB-209ENST00000481673 WWC2Q6AWC2 1192 aa22.68■■□□□ 1.22
CHKB-209ENST00000481673 CCDC194A0A1B0GVG4 234 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 M0R2N6 131 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 LONRF3Q496Y0 759 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 GPATCH4Q5T3I0 446 aaKnown RBP22.67■■□□□ 1.22
CHKB-209ENST00000481673 USP17L2Q6R6M4 530 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 C11orf57Q6ZUT1 292 aaPredicted RBP22.67■■□□□ 1.22
CHKB-209ENST00000481673 HEATR3Q7Z4Q2 680 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 PIBF1Q8WXW3 757 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 C6orf50Q9HD87 102 aa22.67■■□□□ 1.22
CHKB-209ENST00000481673 ESYT2A0FGR8 921 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 SMTNL1A8MU46 457 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 TPM4P67936 248 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 TRIM34Q9BYJ4 488 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 CSRNP2Q9H175 543 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 CLIP2Q9UDT6 1046 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 DEFB132Q7Z7B7 95 aa22.66■■□□□ 1.22
CHKB-209ENST00000481673 METTL16Q86W50 562 aaKnown RBP22.66■■□□□ 1.22
CHKB-209ENST00000481673 GPKOWQ92917 476 aaPredicted RBP eCLIP22.66■■□□□ 1.22
CHKB-209ENST00000481673 FAM205CA6NFA0 338 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 LAD1O00515 517 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 GOLGA8HP0CJ92 632 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 VEGFAP15692 232 aaPredicted RBP22.65■■□□□ 1.22
CHKB-209ENST00000481673 TGFB2P61812 414 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 PTGDRQ13258 359 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 ZNF174Q15697 407 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 SLC35G1Q2M3R5 365 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 TRIM5Q9C035 493 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 KANSL2Q9H9L4 492 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 FAM198AQ9UFP1 575 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 HDAC9Q9UKV0 1011 aa22.65■■□□□ 1.22
CHKB-209ENST00000481673 COL2A1P02458 1487 aaPredicted RBP22.65■■□□□ 1.22
CHKB-209ENST00000481673 USP17L5A8MUK1 530 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 POLR2DO15514 142 aaKnown RBP22.64■■□□□ 1.22
CHKB-209ENST00000481673 CDC25BP30305 580 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 NAPAP54920 295 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 TATDN1Q6P1N9 297 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 KRT25Q7Z3Z0 450 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 PLA2G4DQ86XP0 818 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 MKL1Q969V6 931 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 RTN4Q9NQC3 1192 aaKnown RBP22.64■■□□□ 1.22
CHKB-209ENST00000481673 MTMR7Q9Y216 660 aa22.64■■□□□ 1.22
CHKB-209ENST00000481673 AP5Z1O43299 807 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 MDM2Q00987 491 aaPredicted RBP22.64■■□□□ 1.21
CHKB-209ENST00000481673 ORC2Q13416 577 aaPredicted RBP22.64■■□□□ 1.21
CHKB-209ENST00000481673 NT5DC1Q5TFE4 455 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 RSBN1LQ6PCB5 846 aaPredicted RBP22.64■■□□□ 1.21
CHKB-209ENST00000481673 DHX40Q8IX18 779 aaKnown RBP22.64■■□□□ 1.21
CHKB-209ENST00000481673 TRIML1Q8N9V2 468 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 NYAP2Q9P242 653 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 PCDHA6Q9UN73 950 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 PCDHA8Q9Y5H6 950 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 ATRNL1Q5VV63 1379 aa22.64■■□□□ 1.21
CHKB-209ENST00000481673 IKBKBO14920 756 aa22.63■■□□□ 1.21
CHKB-209ENST00000481673 ZNF500O60304 480 aaPredicted RBP22.63■■□□□ 1.21
CHKB-209ENST00000481673 VIL1P09327 827 aaKnown RBP22.63■■□□□ 1.21
CHKB-209ENST00000481673 CFAP100Q494V2 611 aa22.63■■□□□ 1.21
CHKB-209ENST00000481673 CERKLQ49MI3 558 aaPredicted RBP22.63■■□□□ 1.21
CHKB-209ENST00000481673 ZSCAN29Q8IWY8 852 aaPredicted RBP22.63■■□□□ 1.21
CHKB-209ENST00000481673 TMOD2Q9NZR1 351 aa22.63■■□□□ 1.21
CHKB-209ENST00000481673 YDJCA8MPS7 323 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 MPHOSPH10O00566 681 aaKnown RBP22.62■■□□□ 1.21
CHKB-209ENST00000481673 DPEP1P16444 411 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 KCNA3P22001 575 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 LONP1P36776 959 aaKnown RBP22.62■■□□□ 1.21
CHKB-209ENST00000481673 ZNF75DP51815 510 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 GRIN1Q05586 938 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 ZNF543Q08ER8 600 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 POSTNQ15063 836 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 PPP1R18Q6NYC8 613 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 LARGE2Q8N3Y3 721 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 OGFOD1Q8N543 542 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 MYO1BO43795 1136 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 SLFN14P0C7P3 912 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 MMP14P50281 582 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 DPCR1Q3MIW9 517 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 TYW1BQ6NUM6 668 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 MRFAP1L1Q96HT8 127 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 DACH1Q9UI36 760 aa22.62■■□□□ 1.21
CHKB-209ENST00000481673 SMCO2A6NFE2 343 aa22.61■■□□□ 1.21
CHKB-209ENST00000481673 SMC2O95347 1197 aa22.61■■□□□ 1.21
CHKB-209ENST00000481673 CT47A1Q5JQC4 288 aaPredicted RBP22.61■■□□□ 1.21
CHKB-209ENST00000481673 SPECC1Q5M775 1068 aa22.61■■□□□ 1.21
CHKB-209ENST00000481673 TMEM179Q6ZVK1 233 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms