RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 MIER1Q8N108 512 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 BOLA2Q9H3K6 86 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
GTF3C2-210ENST00000480989 STRNO43815 780 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 FLOT1O75955 427 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 PGK2P07205 417 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 CDK8P49336 464 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 BADQ92934 168 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 FERMT2Q96AC1 680 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 KIF1BPQ96EK5 621 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 TTYH1Q9H313 450 aaPredicted RBP11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 HOXC10Q9NYD6 342 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 MYH4Q9Y623 1939 aa11.25□□□□□ -0.61
GTF3C2-210ENST00000480989 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 USP17L21D6R901 530 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 ZNF865P0CJ78 1059 aaPredicted RBP11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 PLS1Q14651 629 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 ABRAQ8N0Z2 381 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 PAG1Q9NWQ8 432 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 ROBO3Q96MS0 1386 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 REV3LO60673 3130 aa11.24□□□□□ -0.61
GTF3C2-210ENST00000480989 LRRC37A2A6NM11 1700 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 ADCY6O43306 1168 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 PGK1P00558 417 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 ATP5JP18859 108 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 ZNF792Q3KQV3 632 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 FGD4Q96M96 766 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 HAUS7Q99871 368 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 MROH8Q9H579 483 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 ATP8A2Q9NTI2 1148 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 CHD7Q9P2D1 2997 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 LCTP09848 1927 aa11.23□□□□□ -0.61
GTF3C2-210ENST00000480989 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 VWA5AO00534 786 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 SMARCA5O60264 1052 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 ADAMTS4O75173 837 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 IFIT2P09913 472 aaKnown RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 TLE2Q04725 743 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 HSP90AB4PQ58FF6 505 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 LBHD1Q9BQE6 289 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 SEMA6BQ9H3T3 888 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 ARHGEF10LQ9HCE6 1279 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 EPB41L4AQ9HCS5 686 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 PPP1R9AQ9ULJ8 1098 aa11.22□□□□□ -0.61
GTF3C2-210ENST00000480989 A0A1W2PQ45 241 aaPredicted RBP11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 A0A1W2PQY0 241 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 KBTBD13C9JR72 458 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 FCER1AP12319 257 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 RASA1P20936 1047 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 CCDC17Q96LX7 622 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 MMP19Q99542 508 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 TINF2Q9BSI4 451 aa11.21□□□□□ -0.61
GTF3C2-210ENST00000480989 TTC28Q96AY4 2481 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 STAT3P40763 770 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 MYLIPQ8WY64 445 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 OSBP2Q969R2 916 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 XPNPEP3Q9NQH7 507 aa11.2□□□□□ -0.62
GTF3C2-210ENST00000480989 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms