RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PRC1O43663 620 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 TLR2O60603 784 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 GADL1Q6ZQY3 521 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 UBE2Q1Q7Z7E8 422 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 RALYLQ86SE5 291 aaKnown RBP14.39□□□□□ -0.11
TRA2B-212ENST00000480461 DGKHQ86XP1 1220 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 SPICE1Q8N0Z3 855 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 C12orf42Q96LP6 360 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 ARHGEF10LQ9HCE6 1279 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 TNKSO95271 1327 aa14.39□□□□□ -0.11
TRA2B-212ENST00000480461 IFIT3O14879 490 aaKnown RBP14.38□□□□□ -0.11
TRA2B-212ENST00000480461 MCM5P33992 734 aa14.38□□□□□ -0.11
TRA2B-212ENST00000480461 NT5C2P49902 561 aa14.38□□□□□ -0.11
TRA2B-212ENST00000480461 KRT32Q14532 448 aa14.38□□□□□ -0.11
TRA2B-212ENST00000480461 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
TRA2B-212ENST00000480461 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
TRA2B-212ENST00000480461 NUP88Q99567 741 aaPredicted RBP14.38□□□□□ -0.11
TRA2B-212ENST00000480461 FEZ1Q99689 392 aa14.38□□□□□ -0.11
TRA2B-212ENST00000480461 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
TRA2B-212ENST00000480461 PDHXO00330 501 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 NDUFB10O96000 172 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 GNRH1P01148 92 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
TRA2B-212ENST00000480461 VCAM1P19320 739 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 PRMT2P55345 433 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
TRA2B-212ENST00000480461 KIF22Q14807 665 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 IQCA1Q86XH1 822 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 PROCA1Q8NCQ7 364 aaPredicted RBP14.37□□□□□ -0.11
TRA2B-212ENST00000480461 C22orf23Q9BZE7 217 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
TRA2B-212ENST00000480461 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 CYP2C8P10632 490 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 CASTP20810 708 aaKnown RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 RPS6KB1P23443 525 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 MCCP23508 829 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 CTGFP29279 349 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 RBM25P49756 843 aaKnown RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 USP14P54578 494 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 ANAPC15P60006 121 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 UBAC1Q9BSL1 405 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 HTATIP2Q9BUP3 242 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 TM6SF1Q9BZW5 370 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
TRA2B-212ENST00000480461 TMOD4Q9NZQ9 345 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 MYH8P13535 1937 aa14.36□□□□□ -0.11
TRA2B-212ENST00000480461 SOX1O00570 391 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-212ENST00000480461 PEX10O60683 326 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 GJA8P48165 433 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 CCDC178Q5BJE1 867 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 BLOC1S2Q6QNY1 142 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 CATSPERGQ6ZRH7 1159 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 ASCC2Q9H1I8 757 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-212ENST00000480461 FBXO28Q9NVF7 368 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 SYNPO2Q9UMS6 1093 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
TRA2B-212ENST00000480461 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 RAD21O60216 631 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
TRA2B-212ENST00000480461 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-212ENST00000480461 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
TRA2B-212ENST00000480461 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 PDHBP11177 359 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 PSMA5P28066 241 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 WTAPQ15007 396 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
TRA2B-212ENST00000480461 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 Q6ZUG5 572 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 LPAR1Q92633 364 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 LRCH3Q96II8 777 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 GMCL1Q96IK5 515 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
TRA2B-212ENST00000480461 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 AGXT2Q9BYV1 514 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 PTPRFP10586 1907 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
TRA2B-212ENST00000480461 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
TRA2B-212ENST00000480461 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms