RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 KLRC3Q07444 240 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 ZNF543Q08ER8 600 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 FUT2Q10981 343 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 SPP2Q13103 211 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 SLFN13Q68D06 897 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 TTBK2Q6IQ55 1244 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 KCTD1Q719H9 257 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 OPTNQ96CV9 577 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 FEZ1Q99689 392 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 KIAA1683Q9H0B3 1180 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 SYNPO2Q9UMS6 1093 aa10.46□□□□□ -0.73
NUDCD3-208ENST00000480209 PTPDC1A2A3K4 754 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CYTH3O43739 400 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CALM1P0DP23 149 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CALM2P0DP24 149 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CALM3P0DP25 149 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 BACE1P56817 501 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 HUNKP57058 714 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 PPIL2Q13356 520 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 MOGSQ13724 837 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 BECN1Q14457 450 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 FAM83BQ5T0W9 1011 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 SYNE3Q6ZMZ3 975 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 ERO1BQ86YB8 467 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 RASAL3Q86YV0 1011 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 C2orf69Q8N8R5 385 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 CTCFLQ8NI51 663 aaPredicted RBP10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 DCAF4Q8WV16 495 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 PHKBQ93100 1093 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 GMCL1Q96IK5 515 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 WNK4Q96J92 1243 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 IPO9Q96P70 1041 aaKnown RBP10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 MAP3K14Q99558 947 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 AS3MTQ9HBK9 375 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 GPCPD1Q9NPB8 672 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 KCNH4Q9UQ05 1017 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 TLL2Q9Y6L7 1015 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 LCTP09848 1927 aa10.45□□□□□ -0.74
NUDCD3-208ENST00000480209 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 hCG_1642624A0A1W2PR95 340 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 RAD21O60216 631 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 PARP1P09874 1014 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 BMP3P12645 472 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 FDPSP14324 419 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 VCAM1P19320 739 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 SLC16A2P36021 539 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 PPATQ06203 517 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 FSTL1Q12841 308 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 SHISA4Q96DD7 197 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 C12orf42Q96LP6 360 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 AIFM3Q96NN9 605 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 SH2D4AQ9H788 454 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 FBXO28Q9NVF7 368 aa10.44□□□□□ -0.74
NUDCD3-208ENST00000480209 UNCXA6NJT0 531 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 KLRF2D3W0D1 207 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 IFNAR1P17181 557 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 TAL1P17542 331 aaPredicted RBP10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 DDIT3P35638 169 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 SLC1A4P43007 532 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 TREML2Q5T2D2 321 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 CCDC82Q8N4S0 544 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 DDX11Q96FC9 970 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 UBA5Q9GZZ9 404 aa10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 RBM28Q9NW13 759 aaKnown RBP10.43□□□□□ -0.74
NUDCD3-208ENST00000480209 STK36Q9NRP7 1315 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 TMEM88BA6NKF7 163 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 FAM155AB1AL88 458 aaPredicted RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 SLC10A3P09131 477 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 GJB2P29033 226 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 KIF5BP33176 963 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 USP14P54578 494 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 SNAP25P60880 206 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 PKN1Q16512 942 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 GPATCH4Q5T3I0 446 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 PIBF1Q8WXW3 757 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 LPAR1Q92633 364 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 INTS4Q96HW7 963 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 RPAP3Q9H6T3 665 aaPredicted RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 ISY1Q9ULR0 285 aaKnown RBP10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 ZSWIM8A7E2V4 1837 aa10.42□□□□□ -0.74
NUDCD3-208ENST00000480209 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms