RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 STAG2Q8N3U4 1231 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 ZBTB40Q9NUA8 1239 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 CNOT7Q9UIV1 285 aaKnown RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 HDAC9Q9UKV0 1011 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 GJA3Q9Y6H8 435 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 COL1A1P02452 1464 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-213ENST00000480102 SCN4AP35499 1836 aa6.06□□□□□ -1.44
PTCD3-213ENST00000480102 MAST3O60307 1309 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 SRGAP3O43295 1099 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 RAD17O75943 681 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 BCRP11274 1271 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 BMP4P12644 408 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 ATP8B2P98198 1209 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 C1orf53Q5VUE5 145 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 TXNRD3Q86VQ6 643 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 ZGPATQ8N5A5 531 aaKnown RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 TMEM57Q8N5G2 664 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 WDR66Q8TBY9 1149 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 RHPN1Q8TCX5 695 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 ZNF526Q8TF50 670 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 SCG3Q8WXD2 468 aaKnown RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 JARID2Q92833 1246 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 KLRG1Q96E93 195 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 HINFPQ9BQA5 517 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 C2orf49Q9BVC5 232 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 OXCT2Q9BYC2 517 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 DBNDD1Q9H9R9 158 aa6.05□□□□□ -1.44
PTCD3-213ENST00000480102 GNL3LQ9NVN8 582 aaKnown RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 LRRFIP2Q9Y608 721 aaKnown RBP6.05□□□□□ -1.44
PTCD3-213ENST00000480102 DICER1Q9UPY3 1922 aaKnown RBP6.04□□□□□ -1.44
PTCD3-213ENST00000480102 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 TMEM88BA6NKF7 163 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 C2CD2LO14523 706 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 KHNYNO15037 678 aaKnown RBP6.04□□□□□ -1.44
PTCD3-213ENST00000480102 EFSO43281 561 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 HMMRO75330 724 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 MAPTP10636 758 aaKnown RBP6.04□□□□□ -1.44
PTCD3-213ENST00000480102 SLC5A1P13866 664 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 IGFBP4P22692 258 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 CTBSQ01459 385 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 TNP2Q05952 138 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 MVPQ14764 893 aaKnown RBP6.04□□□□□ -1.44
PTCD3-213ENST00000480102 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 HHIPL2Q6UWX4 724 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 TICAM2Q86XR7 235 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 CERS3Q8IU89 383 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 ERC1Q8IUD2 1116 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 FRAT1Q92837 279 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-213ENST00000480102 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 PHACTR1Q9C0D0 580 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 MYOZ2Q9NPC6 264 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 ENAMQ9NRM1 1142 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 HCN2Q9UL51 889 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 HCN4Q9Y3Q4 1203 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 TIAM2Q8IVF5 1701 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 SBF1O95248 1867 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 COL4A1P02462 1669 aa6.04□□□□□ -1.44
PTCD3-213ENST00000480102 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 WNT10BO00744 389 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 OIP5O43482 229 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 MYO1BO43795 1136 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 TAF5LO75529 589 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 RLBP1P12271 317 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 MAP2K2P36507 400 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 TNFAIP1Q13829 316 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 MAP3K11Q16584 847 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 ATP2B3Q16720 1220 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 KIF4BQ2VIQ3 1234 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 LRRC24Q50LG9 513 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 LRRC69Q6ZNQ3 347 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 SLC51AQ86UW1 340 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 VPS37DQ86XT2 251 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 APOBEC3FQ8IUX4 373 aaKnown RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 ALDH16A1Q8IZ83 802 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 FAM200AQ8TCP9 573 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 DCPSQ96C86 337 aaKnown RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 ZDHHC15Q96MV8 337 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 PUS3Q9BZE2 481 aaKnown RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 GDF2Q9UK05 429 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 DENND2AQ9ULE3 1009 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 NOVA2Q9UNW9 492 aaKnown RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 CNTNAP1P78357 1384 aa6.03□□□□□ -1.44
PTCD3-213ENST00000480102 RPAP1Q9BWH6 1393 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-213ENST00000480102 RNF225M0QZC1 329 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-213ENST00000480102 CA12O43570 354 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 RAB11FIP3O75154 756 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 LGR5O75473 907 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 UQCRFS1P1P0C7P4 283 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 CD33P20138 364 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 KLRK1P26718 216 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 ARID4AP29374 1257 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-213ENST00000480102 G3BP1Q13283 466 aaKnown RBP eCLIP6.02□□□□□ -1.451e-8■■■□□ 17
PTCD3-213ENST00000480102 LAMC2Q13753 1193 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 ELOAQ14241 798 aaKnown RBP6.02□□□□□ -1.45
PTCD3-213ENST00000480102 MFSD14BQ5SR56 506 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 CEP85Q6P2H3 762 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 KRT26Q7Z3Y9 468 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 SAPCD2Q86UD0 394 aa6.02□□□□□ -1.45
PTCD3-213ENST00000480102 FAM83AQ86UY5 434 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms