RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 LBX2Q6XYB7 198 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 MOV10L1Q9BXT6 1211 aaKnown RBP11.9□□□□□ -0.5
GPNMB-211ENST00000479625 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
GPNMB-211ENST00000479625 CYP2E1P05181 493 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-211ENST00000479625 TATDN1Q6P1N9 297 aa11.89□□□□□ -0.51
GPNMB-211ENST00000479625 LENG1Q96BZ8 264 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-211ENST00000479625 ZNF576Q9H609 170 aa11.89□□□□□ -0.51
GPNMB-211ENST00000479625 NOB1Q9ULX3 412 aaKnown RBP11.89□□□□□ -0.51
GPNMB-211ENST00000479625 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 RAG1P15918 1043 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 PBX2P40425 430 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 USP14P54578 494 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 FPGSQ05932 587 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 MTX1Q13505 466 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 TTC39AQ5SRH9 613 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 C1orf53Q5VUE5 145 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 MIGA1Q8NAN2 632 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 TIFAQ96CG3 184 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 PIH1D3Q9NQM4 214 aaKnown RBP11.88□□□□□ -0.51
GPNMB-211ENST00000479625 THEGQ9P2T0 379 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 MCM3APO60318 1980 aa11.88□□□□□ -0.51
GPNMB-211ENST00000479625 BAZ2AQ9UIF9 1905 aaKnown RBP11.88□□□□□ -0.51
GPNMB-211ENST00000479625 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
GPNMB-211ENST00000479625 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 GRXCR1A8MXD5 290 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 E9PSI1 815 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 KIAA0355O15063 1070 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 PGK1P00558 417 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 ERCC3P19447 782 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 SHMT1P34896 483 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 ABCB5Q2M3G0 1257 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 MAML3Q96JK9 1138 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 PRDM12Q9H4Q4 367 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
GPNMB-211ENST00000479625 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 CYP7A1P22680 504 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 ZAP70P43403 619 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 USP5P45974 858 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 PLS1Q14651 629 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 SEPT2Q15019 361 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 CCDC85BQ15834 202 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 KIAA1755Q5JYT7 1200 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 NCAPG2Q86XI2 1143 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 FAM122AQ96E09 287 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 ASB2Q96Q27 587 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 GAS2L1Q99501 681 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
GPNMB-211ENST00000479625 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 SERPINB13Q9UIV8 391 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 NCOR1O75376 2440 aa11.86□□□□□ -0.51
GPNMB-211ENST00000479625 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 ANP32CO43423 234 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 NUDT7P0C024 238 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 RARBP10826 455 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 TAL1P17542 331 aaPredicted RBP11.85□□□□□ -0.51
GPNMB-211ENST00000479625 FAAP100Q0VG06 881 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 ADGRE1Q14246 886 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
GPNMB-211ENST00000479625 PBX4Q9BYU1 374 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 API5Q9BZZ5 524 aaKnown RBP11.85□□□□□ -0.51
GPNMB-211ENST00000479625 EHD4Q9H223 541 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
GPNMB-211ENST00000479625 STRNO43815 780 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 PLCD1P51178 756 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 COG2Q14746 738 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 CLEC10AQ8IUN9 316 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 SLC44A5Q8NCS7 719 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 ATG4CQ96DT6 458 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
GPNMB-211ENST00000479625 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
GPNMB-211ENST00000479625 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms