RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 GJB1P08034 283 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 CCL5P13501 91 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 NOVP48745 357 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
SP140-210ENST00000479539 SPATC1LQ9H0A9 340 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 FBXO28Q9NVF7 368 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 PPP1R9AQ9ULJ8 1098 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 CENPFP49454 3210 aa12.49□□□□□ -0.41
SP140-210ENST00000479539 ATAD5Q96QE3 1844 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 SLC15A5A6NIM6 579 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 TSPY2A6NKD2 308 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 VWA5AO00534 786 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 RAD21O60216 631 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
SP140-210ENST00000479539 INHAP05111 366 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 PCP11498 1178 aaKnown RBP12.48□□□□□ -0.41
SP140-210ENST00000479539 CYP2B6P20813 491 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 PTPREP23469 700 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 MAP2K5Q13163 448 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 TRMT44Q8IYL2 757 aaKnown RBP12.48□□□□□ -0.41
SP140-210ENST00000479539 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
SP140-210ENST00000479539 DSCC1Q9BVC3 393 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
SP140-210ENST00000479539 MYH7P12883 1935 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
SP140-210ENST00000479539 STRNO43815 780 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 HMGCRP04035 888 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 HOXC6P09630 235 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 ERCC3P19447 782 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 CHMLP26374 656 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 RGS2P41220 211 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 GJA8P48165 433 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 NT5C2P49902 561 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 HAND2P61296 217 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 GRB14Q14449 540 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 LRRC47Q8N1G4 583 aaKnown RBP12.47□□□□□ -0.41
SP140-210ENST00000479539 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 STAG1Q8WVM7 1258 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 TRIB2Q92519 343 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 IL25Q9H293 177 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 BRCA2P51587 3418 aa12.47□□□□□ -0.41
SP140-210ENST00000479539 ZNF213O14771 459 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 NMT2O60551 498 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 SLC25A27O95847 323 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 CAPN2P17655 700 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 STAT3P40763 770 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 CENPQQ7L2Z9 268 aaPredicted RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 APBA2Q99767 749 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 MROH8Q9H579 483 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 FEM1BQ9UK73 627 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
SP140-210ENST00000479539 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
SP140-210ENST00000479539 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.42
SP140-210ENST00000479539 RAD50Q92878 1312 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 SGPL1O95470 568 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 IGHA2P01877 340 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 BMP3P12645 472 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 TRIM32Q13049 653 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 PLS1Q14651 629 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 RRP12Q5JTH9 1297 aaKnown RBP12.45□□□□□ -0.42
SP140-210ENST00000479539 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 ABRAQ8N0Z2 381 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
SP140-210ENST00000479539 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
SP140-210ENST00000479539 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 SHISA4Q96DD7 197 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 TTC14Q96N46 770 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 TOMM22Q9NS69 142 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 IVNS1ABPQ9Y6Y0 642 aa12.45□□□□□ -0.42
SP140-210ENST00000479539 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 HAX1O00165 279 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 PLA2G6O60733 806 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
SP140-210ENST00000479539 MCCP23508 829 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 ADORA2AP29274 412 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 COPB2P35606 906 aa12.44□□□□□ -0.42
SP140-210ENST00000479539 SLC1A4P43007 532 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms