RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 LPAR1Q92633 364 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 C11orf49Q9H6J7 331 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 NR2E3Q9Y5X4 410 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 ERC2O15083 957 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 PRAMEF19Q5SWL8 479 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 IFNL3Q8IZI9 196 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 NBPF3Q9H094 633 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 KANSL2Q9H9L4 492 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 STAP2Q9UGK3 403 aa20.79■□□□□ 0.92
ECHDC1-216ENST00000479525 ROBO3Q96MS0 1386 aa20.78■□□□□ 0.92
ECHDC1-216ENST00000479525 FAM47AQ5JRC9 791 aa20.78■□□□□ 0.92
ECHDC1-216ENST00000479525 MFSD14CQ5VZR4 134 aa20.78■□□□□ 0.92
ECHDC1-216ENST00000479525 TRMT44Q8IYL2 757 aaKnown RBP20.78■□□□□ 0.92
ECHDC1-216ENST00000479525 ZFYP08048 801 aaPredicted RBP20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 ZMYM1Q5SVZ6 1142 aa20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 LRRC47Q8N1G4 583 aaKnown RBP20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 ANKLE1Q8NAG6 615 aa20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 GOPCQ9HD26 462 aa20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 CLIP2Q9UDT6 1046 aa20.77■□□□□ 0.92
ECHDC1-216ENST00000479525 MCM3APO60318 1980 aa20.77■□□□□ 0.91
ECHDC1-216ENST00000479525 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
ECHDC1-216ENST00000479525 PGK2P07205 417 aa20.76■□□□□ 0.91
ECHDC1-216ENST00000479525 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
ECHDC1-216ENST00000479525 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
ECHDC1-216ENST00000479525 FOXP2O15409 715 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 NDUFB10O96000 172 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 VPS53Q5VIR6 699 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 GIMAP6Q6P9H5 292 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 LNPKQ9C0E8 428 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 PPP1R9AQ9ULJ8 1098 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 TACC3Q9Y6A5 838 aa20.75■□□□□ 0.91
ECHDC1-216ENST00000479525 F5H6K3 240 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 HOXC6P09630 235 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 KLRC3Q07444 240 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 LRRC26Q2I0M4 334 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 RASGRP2Q7LDG7 609 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 ZNF444Q8N0Y2 327 aaPredicted RBP20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 NAPBQ9H115 298 aa20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 ZBTB47Q9UFB7 747 aaPredicted RBP20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 DDX20Q9UHI6 824 aaKnown RBP20.74■□□□□ 0.91
ECHDC1-216ENST00000479525 IGKV6D-41A0A0C4DH26 115 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 VWA5AO00534 786 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 CYBAP13498 195 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 GNAT2P19087 354 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 ATN1P54259 1190 aaPredicted RBP20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 PPARAQ07869 468 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 MB21D1Q8N884 522 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 PRO3102Q9H379 93 aa20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 ISY1Q9ULR0 285 aaKnown RBP20.73■□□□□ 0.91
ECHDC1-216ENST00000479525 PDE1AP54750 535 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 GJC2Q5T442 439 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 CPXCR1Q8N123 301 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 MMP19Q99542 508 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 NYAP2Q9P242 653 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 ZNF214Q9UL59 606 aaPredicted RBP20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 MTMR7Q9Y216 660 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 RIPK3Q9Y572 518 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 COL6A1P12109 1028 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 STAT3P40763 770 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 MAML3Q96JK9 1138 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 FAM227BQ96M60 508 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 MROH8Q9H579 483 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 ADAMTS5Q9UNA0 930 aa20.72■□□□□ 0.91
ECHDC1-216ENST00000479525 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 SOX1O00570 391 aaPredicted RBP20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 STRNO43815 780 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 NMT2O60551 498 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 IGHA2P01877 340 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 FCER1AP12319 257 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 TFAP4Q01664 338 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 LRRFIP1Q32MZ4 808 aaKnown RBP20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 SNRNP48Q6IEG0 339 aaKnown RBP20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 RIOX2Q8IUF8 465 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 LENG1Q96BZ8 264 aaPredicted RBP20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
ECHDC1-216ENST00000479525 TAL1P17542 331 aaPredicted RBP20.7■□□□□ 0.9
ECHDC1-216ENST00000479525 HDAC1Q13547 482 aaPredicted RBP20.7■□□□□ 0.9
ECHDC1-216ENST00000479525 RAVER2Q9HCJ3 691 aaKnown RBP20.7■□□□□ 0.9
ECHDC1-216ENST00000479525 IGHDP01880 384 aa20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 MAGEA10P43363 369 aaPredicted RBP20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 SNAP25P60880 206 aa20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 OLFML2BQ68BL8 750 aa20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 LAMA3Q16787 3333 aa20.69■□□□□ 0.9
ECHDC1-216ENST00000479525 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms