RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 CTGFP29279 349 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 TDO2P48775 406 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 CCDC129Q6ZRS4 1044 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 TTC13Q8NBP0 860 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
FXR1-213ENST00000479176 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
FXR1-213ENST00000479176 PARP14Q460N5 1801 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 RLFQ13129 1914 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
FXR1-213ENST00000479176 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 POTEMA6NI47 508 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 MINDY4BA8MYZ0 360 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
FXR1-213ENST00000479176 GNRH1P01148 92 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 APPP05067 770 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 SDSP20132 328 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 USP14P54578 494 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
FXR1-213ENST00000479176 MCMDC2Q4G0Z9 681 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 SIAH1Q8IUQ4 282 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
FXR1-213ENST00000479176 RILPL2Q969X0 211 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 FEZ1Q99689 392 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
FXR1-213ENST00000479176 MYH4Q9Y623 1939 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 VCAM1P19320 739 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 RASA1P20936 1047 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
FXR1-213ENST00000479176 KIF22Q14807 665 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 ALX1Q15699 326 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 FAM110CQ1W6H9 321 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 TRIM47Q96LD4 638 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
FXR1-213ENST00000479176 NAPBQ9H115 298 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
FXR1-213ENST00000479176 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
FXR1-213ENST00000479176 PSMC4P43686 418 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 PRMT2P55345 433 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 HERVK_113P62684 666 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
FXR1-213ENST00000479176 ICA1Q05084 483 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 PPARAQ07869 468 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
FXR1-213ENST00000479176 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
FXR1-213ENST00000479176 CLEC10AQ8IUN9 316 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
FXR1-213ENST00000479176 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
FXR1-213ENST00000479176 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 PLIN4Q96Q06 1357 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
FXR1-213ENST00000479176 IGKV6D-41A0A0C4DH26 115 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L15C9J2P7 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L13C9JLJ4 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L11C9JVI0 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L18D6R9N7 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L22D6RA61 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L17D6RBQ6 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L19D6RCP7 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L20D6RJB6 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 HIP1O00291 1037 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 HSPD1P10809 573 aaKnown RBP12.59□□□□□ -0.39
FXR1-213ENST00000479176 FCGRTP55899 365 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
FXR1-213ENST00000479176 USP17L24Q0WX57 530 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
FXR1-213ENST00000479176 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 ANAPC4Q9UJX5 808 aa12.59□□□□□ -0.39
FXR1-213ENST00000479176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
FXR1-213ENST00000479176 PLXNB2O15031 1838 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 PRDM1O75626 825 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
FXR1-213ENST00000479176 OATP04181 439 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 SLC3A2P08195 630 aaKnown RBP12.58□□□□□ -0.4
FXR1-213ENST00000479176 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
FXR1-213ENST00000479176 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 STK11IPQ8N1F8 1099 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 LPAR1Q92633 364 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
FXR1-213ENST00000479176 VCPKMTQ9H867 229 aa12.58□□□□□ -0.4
FXR1-213ENST00000479176 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms