RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 TM9SF2Q99805 663 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 TPX2Q9ULW0 747 aaKnown RBP7.8□□□□□ -1.16
CCDC171-207ENST00000478913 CCDC88BA6NC98 1476 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
CCDC171-207ENST00000478913 GBP1P32455 592 aa7.79□□□□□ -1.16
CCDC171-207ENST00000478913 CHMP4BP1P59074 171 aa7.79□□□□□ -1.16
CCDC171-207ENST00000478913 SF3A1Q15459 793 aaKnown RBP7.79□□□□□ -1.16
CCDC171-207ENST00000478913 CPSF6Q16630 551 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCDC171-207ENST00000478913 ZNF746Q6NUN9 644 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-207ENST00000478913 ZDHHC13Q8IUH4 622 aa7.79□□□□□ -1.16
CCDC171-207ENST00000478913 KIF2CQ99661 725 aa7.79□□□□□ -1.16
CCDC171-207ENST00000478913 PPP1R1BQ9UD71 204 aaPredicted RBP7.79□□□□□ -1.16
CCDC171-207ENST00000478913 MRVI1Q9Y6F6 885 aa7.79□□□□□ -1.16
CCDC171-207ENST00000478913 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 RGS13O14921 159 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 EOMESO95936 686 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 POLR2BP30876 1174 aaKnown RBP7.78□□□□□ -1.16
CCDC171-207ENST00000478913 ETV3P41162 512 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 CDH24Q86UP0 819 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 RIN3Q8TB24 985 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 BAHD1Q8TBE0 780 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-207ENST00000478913 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
CCDC171-207ENST00000478913 GTF2IRD1Q9UHL9 959 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 RAPGEF2Q9Y4G8 1499 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
CCDC171-207ENST00000478913 PLA2R1Q13018 1463 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 ATP2B1P20020 1258 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 GUCY2CP25092 1073 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 ARHGAP27Q6ZUM4 889 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 TAB3Q8N5C8 712 aaPredicted RBP7.77□□□□□ -1.17
CCDC171-207ENST00000478913 DNAJB8Q8NHS0 232 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 SREK1Q8WXA9 508 aaKnown RBP7.77□□□□□ -1.17
CCDC171-207ENST00000478913 CEP131Q9UPN4 1083 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 LEMD3Q9Y2U8 911 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 CARMIL2Q6F5E8 1435 aa7.77□□□□□ -1.17
CCDC171-207ENST00000478913 DENND4BO75064 1496 aaPredicted RBP7.76□□□□□ -1.17
CCDC171-207ENST00000478913 FAM86C2PA6NEL3 165 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 CYP7A1P22680 504 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 CCNFP41002 786 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 INTS3Q68E01 1043 aaKnown RBP7.76□□□□□ -1.17
CCDC171-207ENST00000478913 PPP1R13LQ8WUF5 828 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 SLC9A7Q96T83 725 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 LRRC4CQ9HCJ2 640 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 PIM2Q9P1W9 311 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 MAPK8IP1Q9UQF2 711 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 EP400Q96L91 3159 aa7.76□□□□□ -1.17
CCDC171-207ENST00000478913 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 ZFYVE16Q7Z3T8 1539 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 UBOX5O94941 541 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 ACRP10323 421 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 PPP2R5EQ16537 467 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 SFRP5Q5T4F7 317 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 ZNF408Q9H9D4 720 aa7.75□□□□□ -1.17
CCDC171-207ENST00000478913 PRR19A6NJB7 356 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 CYP26A1O43174 497 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 STK10O94804 968 aaKnown RBP7.74□□□□□ -1.17
CCDC171-207ENST00000478913 TGFB1P01137 390 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 ETFBP38117 255 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 TNNI3KQ59H18 835 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 NBPF11Q86T75 865 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 C19orf47Q8N9M1 422 aaKnown RBP7.74□□□□□ -1.17
CCDC171-207ENST00000478913 COX4I2Q96KJ9 171 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 HEXIM2Q96MH2 286 aaKnown RBP7.74□□□□□ -1.17
CCDC171-207ENST00000478913 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC171-207ENST00000478913 PRKAG3Q9UGI9 489 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 SLC12A7Q9Y666 1083 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 NEO1Q92859 1461 aa7.74□□□□□ -1.17
CCDC171-207ENST00000478913 TOP2AP11388 1531 aaKnown RBP7.73□□□□□ -1.17
CCDC171-207ENST00000478913 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 IGF2BP3O00425 579 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC171-207ENST00000478913 SMAD7O15105 426 aaKnown RBP7.73□□□□□ -1.17
CCDC171-207ENST00000478913 CLEC3AO75596 197 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 FOSL1P15407 271 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 GTF2F1P35269 517 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC171-207ENST00000478913 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 TTC6Q86TZ1 520 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 FAM181AQ8N9Y4 354 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 RNF141Q8WVD5 230 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 KREMEN1Q96MU8 473 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 SLC6A18Q96N87 628 aa7.73□□□□□ -1.17
CCDC171-207ENST00000478913 RNF17Q9BXT8 1623 aaKnown RBP7.72□□□□□ -1.17
CCDC171-207ENST00000478913 GRIK1P39086 918 aa7.72□□□□□ -1.17
CCDC171-207ENST00000478913 RNF4P78317 190 aa7.72□□□□□ -1.17
CCDC171-207ENST00000478913 ZYXQ15942 572 aaKnown RBP7.72□□□□□ -1.17
CCDC171-207ENST00000478913 DHRS1Q96LJ7 313 aa7.72□□□□□ -1.17
CCDC171-207ENST00000478913 ACTR10Q9NZ32 417 aa7.72□□□□□ -1.17
CCDC171-207ENST00000478913 R3HCC1Q9Y3T6 440 aaKnown RBP7.72□□□□□ -1.17
CCDC171-207ENST00000478913 A0A1W2PQH9 124 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 CBX7O95931 251 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 ITIH2P19823 946 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 KIR3DL1P43629 444 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 CASP7P55210 303 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 OXCT1P55809 520 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 TMEM192Q8IY95 271 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 ARMC5Q96C12 935 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms