RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDCD11-204ENST00000478543 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 AGXT2Q9BYV1 514 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 CDH23Q9H251 3354 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-204ENST00000478543 TLR2O60603 784 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 LIFRP42702 1097 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 MCM2P49736 904 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-204ENST00000478543 ICA1Q05084 483 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 BECN1Q14457 450 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 RCSD1Q6JBY9 416 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-204ENST00000478543 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
PDCD11-204ENST00000478543 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 TRIM47Q96LD4 638 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 ZNF112Q9UJU3 913 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
PDCD11-204ENST00000478543 DOCK1Q14185 1865 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
PDCD11-204ENST00000478543 RXRAP19793 462 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 GJA8P48165 433 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 SLC4A3P48751 1232 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 ME3Q16798 604 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 DGKHQ86XP1 1220 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
PDCD11-204ENST00000478543 FBXL16Q8N461 479 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 TMEM47Q9BQJ4 181 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 KANSL2Q9H9L4 492 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 SLC12A7Q9Y666 1083 aa13.67□□□□□ -0.22
PDCD11-204ENST00000478543 TTLL1O95922 423 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 ASNSP08243 561 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
PDCD11-204ENST00000478543 CCL5P13501 91 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
PDCD11-204ENST00000478543 GTF2A2P52657 109 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
PDCD11-204ENST00000478543 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 C17orf99Q6UX52 265 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 Q7L0L9 218 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 CATIPQ7Z7H3 387 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 SGMS1Q86VZ5 419 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 MICU3Q86XE3 530 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 CCDC144CPQ8IYA2 1237 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 TMTC2Q8N394 836 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 ANKS1AQ92625 1134 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 ZSCAN31Q96LW9 406 aaPredicted RBP13.66□□□□□ -0.22
PDCD11-204ENST00000478543 PICK1Q9NRD5 415 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
PDCD11-204ENST00000478543 ADGRA2Q96PE1 1338 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 ZBTB43O43298 467 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 RAD21O60216 631 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 OSBPP22059 807 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
PDCD11-204ENST00000478543 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 CCDC83Q8IWF9 413 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 PNMA1Q8ND90 353 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 ZNF274Q96GC6 653 aaPredicted RBP13.65□□□□□ -0.22
PDCD11-204ENST00000478543 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
PDCD11-204ENST00000478543 SLKQ9H2G2 1235 aaPredicted RBP13.65□□□□□ -0.22
PDCD11-204ENST00000478543 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
PDCD11-204ENST00000478543 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 CPA4Q9UI42 421 aa13.65□□□□□ -0.22
PDCD11-204ENST00000478543 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 IRF6O14896 467 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 PFKFB2O60825 505 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 DTNBO60941 627 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 GJB1P08034 283 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 NOVP48745 357 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDCD11-204ENST00000478543 ARHGEF6Q15052 776 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
PDCD11-204ENST00000478543 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
PDCD11-204ENST00000478543 RASGRP2Q7LDG7 609 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 SIAH1Q8IUQ4 282 aa13.64□□□□□ -0.23
PDCD11-204ENST00000478543 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms