RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 RNF40O75150 1001 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 TRIM14Q14142 442 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 N4BP3O15049 544 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 CORO7P57737 925 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 TTC31Q49AM3 519 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 TRIM37O94972 964 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 USP14P54578 494 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 AFAP1L1Q8TED9 768 aa16.78■□□□□ 0.28
U2AF1-210ENST00000478282 SYMPKQ92797 1274 aaKnown RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 NUP88Q99567 741 aaPredicted RBP16.78■□□□□ 0.28
U2AF1-210ENST00000478282 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 LRRC10BA6NIK2 292 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 SYF2O95926 243 aaKnown RBP16.77■□□□□ 0.28
U2AF1-210ENST00000478282 CDC25AP30304 524 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
U2AF1-210ENST00000478282 WTAPQ15007 396 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 TRAPPC11Q7Z392 1133 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.28
U2AF1-210ENST00000478282 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
U2AF1-210ENST00000478282 RGL2O15211 777 aa16.77■□□□□ 0.27
U2AF1-210ENST00000478282 PPFIA4O75335 1185 aa16.77■□□□□ 0.27
U2AF1-210ENST00000478282 TRIM28Q13263 835 aaKnown RBP16.77■□□□□ 0.27
U2AF1-210ENST00000478282 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.27
U2AF1-210ENST00000478282 LDHAL6AQ6ZMR3 332 aa16.77■□□□□ 0.27
U2AF1-210ENST00000478282 PROM2Q8N271 834 aa16.77■□□□□ 0.27
U2AF1-210ENST00000478282 ZBTB1Q9Y2K1 713 aa16.77■□□□□ 0.27
U2AF1-210ENST00000478282 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
U2AF1-210ENST00000478282 MCM3P25205 808 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 MAP9Q49MG5 647 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 PACS2Q86VP3 889 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 FAM205CA6NFA0 338 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 COPB1P53618 953 aaKnown RBP16.76■□□□□ 0.27
U2AF1-210ENST00000478282 AKAP17AQ02040 695 aaKnown RBP16.76■□□□□ 0.27
U2AF1-210ENST00000478282 SPAG1Q07617 926 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 KRT9P35527 623 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 ICE2Q659A1 982 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 PPM1EQ8WY54 764 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 VPS16Q9H269 839 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 HPCAL4Q9UM19 191 aa16.76■□□□□ 0.27
U2AF1-210ENST00000478282 PSMD14O00487 310 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-210ENST00000478282 RCAN1P53805 252 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
U2AF1-210ENST00000478282 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-210ENST00000478282 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 REXO2Q9Y3B8 237 aaKnown RBP16.75■□□□□ 0.27
U2AF1-210ENST00000478282 MYH13Q9UKX3 1938 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 MBD4O95243 580 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 PHKA1P46020 1223 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
U2AF1-210ENST00000478282 COBLO75128 1261 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 NDUFA10O95299 355 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 TRIM10Q9UDY6 481 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
U2AF1-210ENST00000478282 ERICH2A1L162 156 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 ITGA6P23229 1130 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 CHP1Q99653 195 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 HAUS4Q9H6D7 363 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
U2AF1-210ENST00000478282 BMP15O95972 392 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 ZNF654Q8IZM8 581 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 NUP133Q8WUM0 1156 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
U2AF1-210ENST00000478282 CCNL1Q9UK58 526 aaPredicted RBP16.74■□□□□ 0.27
U2AF1-210ENST00000478282 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
U2AF1-210ENST00000478282 TARSL2A2RTX5 802 aaKnown RBP16.73■□□□□ 0.27
U2AF1-210ENST00000478282 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
U2AF1-210ENST00000478282 EARS2Q5JPH6 523 aaKnown RBP16.73■□□□□ 0.27
U2AF1-210ENST00000478282 RRAGBQ5VZM2 374 aa16.73■□□□□ 0.27
U2AF1-210ENST00000478282 COG1Q8WTW3 980 aa16.73■□□□□ 0.27
U2AF1-210ENST00000478282 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
U2AF1-210ENST00000478282 XDHP47989 1333 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms