RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 F5H6K3 240 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 SLC16A2P36021 539 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
GFM1-206ENST00000478251 KLRC3Q07444 240 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
GFM1-206ENST00000478251 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 H3BQV1 296 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFM1-206ENST00000478251 PRKG1Q13976 671 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
GFM1-206ENST00000478251 KLRG1Q96E93 195 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFM1-206ENST00000478251 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
GFM1-206ENST00000478251 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 WRNIP1Q96S55 665 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 RIOX1Q9H6W3 641 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 RLFQ13129 1914 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 RAD21O60216 631 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 ASNSP08243 561 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 ZYXQ15942 572 aaKnown RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
GFM1-206ENST00000478251 PIGSQ96S52 555 aa13.13□□□□□ -0.31
GFM1-206ENST00000478251 SCG2P13521 617 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 MOB2Q70IA6 237 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
GFM1-206ENST00000478251 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 MMP1P03956 469 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 SLC1A4P43007 532 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 GNAQP50148 359 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 NR5A1Q13285 461 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 CCDC96Q2M329 555 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
GFM1-206ENST00000478251 DCAF15Q66K64 600 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
GFM1-206ENST00000478251 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
GFM1-206ENST00000478251 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 PHF20Q9BVI0 1012 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 JMJD4Q9H9V9 463 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
GFM1-206ENST00000478251 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 PTPRAP18433 802 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
GFM1-206ENST00000478251 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 LMBRD1Q9NUN5 540 aa13.11□□□□□ -0.31
GFM1-206ENST00000478251 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
GFM1-206ENST00000478251 STXBP3O00186 592 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 TRAF5O00463 557 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
GFM1-206ENST00000478251 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
GFM1-206ENST00000478251 SNAP25P60880 206 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
GFM1-206ENST00000478251 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 SNCAIPQ9Y6H5 919 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 FIBPO43427 364 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
GFM1-206ENST00000478251 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 AKAP17AQ02040 695 aaKnown RBP13.1□□□□□ -0.31
GFM1-206ENST00000478251 VGLL4Q14135 290 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 FAM83BQ5T0W9 1011 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
GFM1-206ENST00000478251 WASF1Q92558 559 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
GFM1-206ENST00000478251 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms