RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
SYCP3-205ENST00000478238 ZNF296Q8WUU4 475 aaPredicted RBP8.11□□□□□ -1.11
SYCP3-205ENST00000478238 LINC01599Q8WXQ3 324 aa8.11□□□□□ -1.11
SYCP3-205ENST00000478238 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
SYCP3-205ENST00000478238 G6PC3Q9BUM1 346 aa8.11□□□□□ -1.11
SYCP3-205ENST00000478238 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYCP3-205ENST00000478238 GPR160Q9UJ42 338 aa8.11□□□□□ -1.11
SYCP3-205ENST00000478238 ZNF16P17020 682 aaPredicted RBP8.1□□□□□ -1.11
SYCP3-205ENST00000478238 MRPL58Q14197 206 aaKnown RBP8.1□□□□□ -1.11
SYCP3-205ENST00000478238 SNX17Q15036 470 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 LDLRAD1Q5T700 205 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 NBPF12Q5TAG4 269 aaPredicted RBP8.1□□□□□ -1.11
SYCP3-205ENST00000478238 RNF111Q6ZNA4 994 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 DAGLBQ8NCG7 672 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
SYCP3-205ENST00000478238 SMG5Q9UPR3 1016 aaKnown RBP8.1□□□□□ -1.11
SYCP3-205ENST00000478238 PSPNO60542 156 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 RPL10P27635 214 aaKnown RBP8.09□□□□□ -1.11
SYCP3-205ENST00000478238 POLR2BP30876 1174 aaKnown RBP8.09□□□□□ -1.11
SYCP3-205ENST00000478238 NBPF9Q3BBW0 867 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 CDCP2Q5VXM1 449 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 TMC3Q7Z5M5 1100 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 ZNF605Q86T29 641 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 SHISA4Q96DD7 197 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 FOXP3Q9BZS1 431 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 EHMT1Q9H9B1 1298 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 ADAMTS1Q9UHI8 967 aa8.09□□□□□ -1.11
SYCP3-205ENST00000478238 SNW1Q13573 536 aaKnown RBP8.08□□□□□ -1.12
SYCP3-205ENST00000478238 ZNF326Q5BKZ1 582 aaKnown RBP8.08□□□□□ -1.12
SYCP3-205ENST00000478238 ATG4CQ96DT6 458 aa8.08□□□□□ -1.12
SYCP3-205ENST00000478238 TCTN2Q96GX1 697 aa8.08□□□□□ -1.12
SYCP3-205ENST00000478238 CNNM2Q9H8M5 875 aa8.08□□□□□ -1.12
SYCP3-205ENST00000478238 UBP1Q9NZI7 540 aa8.08□□□□□ -1.12
SYCP3-205ENST00000478238 MYOCOSA0A1B0GUC4 107 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 NOTOA8MTQ0 251 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 PEX10O60683 326 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 PDE6BP35913 854 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 GALK1P51570 392 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 LINC00310P59036 64 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 CLCQ05315 142 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 SEZ6Q53EL9 994 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 CIAPIN1Q6FI81 312 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 GK5Q6ZS86 529 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 AMIGO3Q86WK7 504 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 ZNF655Q8N720 491 aaPredicted RBP8.07□□□□□ -1.12
SYCP3-205ENST00000478238 ZNF552Q9H707 407 aaPredicted RBP8.07□□□□□ -1.12
SYCP3-205ENST00000478238 TCFL5Q9UL49 500 aa8.07□□□□□ -1.12
SYCP3-205ENST00000478238 USP2O75604 605 aaPredicted RBP8.06□□□□□ -1.12
SYCP3-205ENST00000478238 PCBP3P57721 371 aaKnown RBP8.06□□□□□ -1.12
SYCP3-205ENST00000478238 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
SYCP3-205ENST00000478238 REXO1Q8N1G1 1221 aaKnown RBP8.06□□□□□ -1.12
SYCP3-205ENST00000478238 MAP6Q96JE9 813 aa8.06□□□□□ -1.12
SYCP3-205ENST00000478238 ZMYM5Q9UJ78 669 aa8.06□□□□□ -1.12
SYCP3-205ENST00000478238 TMEM82A0PJX8 343 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 SEMA7AO75326 666 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 CLEC3AO75596 197 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 PRAMEF1O95521 474 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 EFEMP2O95967 443 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 CCNFP41002 786 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 DLG4P78352 724 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 NLRX1Q86UT6 975 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
SYCP3-205ENST00000478238 ZNF512BQ96KM6 892 aaPredicted RBP8.05□□□□□ -1.12
SYCP3-205ENST00000478238 SSU72P8A0A1W2PR75 194 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 NUAK1O60285 661 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 SYPP08247 313 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 MCM4P33991 863 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 BBS9Q3SYG4 887 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 SIRT2Q8IXJ6 389 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 KRTAP4-9Q9BYQ8 210 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 PRDM14Q9GZV8 571 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 ANTXR1Q9H6X2 564 aa8.04□□□□□ -1.12
SYCP3-205ENST00000478238 TEX51A0A1B0GUA7 166 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 NRDCO43847 1150 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 FKTNO75072 461 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 NME1P15531 152 aaKnown RBP8.03□□□□□ -1.12
SYCP3-205ENST00000478238 KIR2DL1P43626 348 aaPredicted RBP8.03□□□□□ -1.12
SYCP3-205ENST00000478238 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
SYCP3-205ENST00000478238 ZNF165P49910 485 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 SLC14A2Q15849 920 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 TMEM132EQ6IEE7 984 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 HHIPL1Q96JK4 782 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 BCL11AQ9H165 835 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 MINPP1Q9UNW1 487 aa8.03□□□□□ -1.12
SYCP3-205ENST00000478238 OR14I1A6ND48 311 aa8.02□□□□□ -1.13
SYCP3-205ENST00000478238 MEIS3P2A8K0S8 358 aa8.02□□□□□ -1.13
SYCP3-205ENST00000478238 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
SYCP3-205ENST00000478238 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
SYCP3-205ENST00000478238 ADGRF1Q5T601 910 aa8.02□□□□□ -1.13
SYCP3-205ENST00000478238 CEP128Q6ZU80 1094 aa8.02□□□□□ -1.13
SYCP3-205ENST00000478238 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms