RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 KIF1BPQ96EK5 621 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 PHF24Q9UPV7 400 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
CCM2-210ENST00000478169 TRIM43BA6NCK2 446 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
CCM2-210ENST00000478169 COPB2P35606 906 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 TMEM132BQ14DG7 1078 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 RNF180Q86T96 592 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
CCM2-210ENST00000478169 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 FERMT2Q96AC1 680 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
CCM2-210ENST00000478169 MMP19Q99542 508 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
CCM2-210ENST00000478169 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 XPNPEP3Q9NQH7 507 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 ROBO3Q96MS0 1386 aa11.64□□□□□ -0.55
CCM2-210ENST00000478169 TMEM265A0A087WTH1 108 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 PRKAB2O43741 272 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 CLTBP09497 229 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 ADD2P35612 726 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 STAT3P40763 770 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 CDK8P49336 464 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 TLE2Q04725 743 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 KCTD2Q14681 263 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 RIOX2Q8IUF8 465 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCM2-210ENST00000478169 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
CCM2-210ENST00000478169 MCM3APO60318 1980 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 USP17L21D6R901 530 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 VWA5AO00534 786 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 RAB11FIP3O75154 756 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 HMMRO75330 724 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 MBD4O95243 580 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 MS4A1P11836 297 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 AKR1A1P14550 325 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 ZNF792Q3KQV3 632 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 MSL3Q8N5Y2 521 aaKnown RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 MAFAQ8NHW3 353 aaPredicted RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 TTYH1Q9H313 450 aaPredicted RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 GREB1LQ9C091 1923 aaPredicted RBP11.62□□□□□ -0.55
CCM2-210ENST00000478169 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
CCM2-210ENST00000478169 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
CCM2-210ENST00000478169 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 APBB1O00213 710 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 PGK1P00558 417 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 PGK2P07205 417 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 ZNF865P0CJ78 1059 aaPredicted RBP11.61□□□□□ -0.55
CCM2-210ENST00000478169 RAG1P15918 1043 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 ATP5JP18859 108 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCM2-210ENST00000478169 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
CCM2-210ENST00000478169 TOX2Q96NM4 488 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 FBXO28Q9NVF7 368 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 ZNF214Q9UL59 606 aaPredicted RBP11.61□□□□□ -0.55
CCM2-210ENST00000478169 CNPY2Q9Y2B0 182 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 PRUNE2Q8WUY3 3088 aa11.61□□□□□ -0.55
CCM2-210ENST00000478169 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 TAL1P17542 331 aaPredicted RBP11.6□□□□□ -0.55
CCM2-210ENST00000478169 ITGB8P26012 769 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 FPGSQ05932 587 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 REPS2Q8NFH8 660 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 MYLIPQ8WY64 445 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 HAUS7Q99871 368 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 TTC28Q96AY4 2481 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 SYNGAP1Q96PV0 1343 aa11.6□□□□□ -0.55
CCM2-210ENST00000478169 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 DCDC2CA8MYV0 355 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
CCM2-210ENST00000478169 ADAMTS4O75173 837 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 FOSL2P15408 326 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 SLFNL1Q499Z3 407 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 ZSCAN25Q6NSZ9 544 aa11.59□□□□□ -0.55
CCM2-210ENST00000478169 CTR9Q6PD62 1173 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms