RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SPATA5Q8NB90 893 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 C17orf50Q8WW18 174 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 PIK3R5Q8WYR1 880 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 CLUAP1Q96AJ1 413 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 NSUN4Q96CB9 384 aaKnown RBP6.83□□□□□ -1.32
TRA2B-211ENST00000477939 DRC1Q96MC2 740 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 LZTS2Q9BRK4 669 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 C22orf23Q9BZE7 217 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 PICK1Q9NRD5 415 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 ETAA1Q9NY74 926 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 PCDH10Q9P2E7 1040 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 SWAP70Q9UH65 585 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 RSPH14Q9UHP6 348 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 AFG3L2Q9Y4W6 797 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 ZHX2Q9Y6X8 837 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 COL6A3P12111 3177 aa6.83□□□□□ -1.32
TRA2B-211ENST00000477939 MYPNQ86TC9 1320 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 TRIM75PA6NK02 468 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 CTNND1O60716 968 aaKnown RBP6.82□□□□□ -1.32
TRA2B-211ENST00000477939 PEX14O75381 377 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 GNAI2P04899 355 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 GTF2F1P35269 517 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRA2B-211ENST00000477939 CCT2P78371 535 aaKnown RBP6.82□□□□□ -1.32
TRA2B-211ENST00000477939 HABP4Q5JVS0 413 aaKnown RBP6.82□□□□□ -1.32
TRA2B-211ENST00000477939 FILIP1Q7Z7B0 1213 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 TAX1BP1Q86VP1 789 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 SLF2Q8IX21 1173 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 TMEM57Q8N5G2 664 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 SMCR8Q8TEV9 937 aaPredicted RBP6.82□□□□□ -1.32
TRA2B-211ENST00000477939 GCC1Q96CN9 775 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 KIF2CQ99661 725 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 SENP7Q9BQF6 1050 aa6.82□□□□□ -1.32
TRA2B-211ENST00000477939 DDX60LQ5H9U9 1706 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 PLXNB2O15031 1838 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 TBC1D12O60347 775 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 NPM3O75607 178 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 FMNL1O95466 1100 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 GRK4P32298 578 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 RDXP35241 583 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 FCGRTP55899 365 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 RWDD2BP57060 319 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 SESN3P58005 492 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 CBX1P83916 185 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 IFT88Q13099 833 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 POLA2Q14181 598 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 RRP1BQ14684 758 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 TREML2Q5T2D2 321 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 MAMSTRQ6ZN01 415 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 GADL1Q6ZQY3 521 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 FASTKD5Q7L8L6 764 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 UBE2Q1Q7Z7E8 422 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 RAET1EQ8TD07 263 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 ZNF396Q96N95 335 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 OSBPL5Q9H0X9 879 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 RSPH9Q9H1X1 276 aaPredicted RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 GABRQQ9UN88 632 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 AGTPBP1Q9UPW5 1226 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 SLC45A1Q9Y2W3 748 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 R3HCC1Q9Y3T6 440 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 LAMA2P24043 3122 aaKnown RBP6.81□□□□□ -1.32
TRA2B-211ENST00000477939 DNAH12Q6ZR08 3092 aa6.81□□□□□ -1.32
TRA2B-211ENST00000477939 ALPK3Q96L96 1907 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 CDKL5O76039 1030 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 CCL5P13501 91 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 PAX3P23760 479 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 HOXD10P28358 340 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 USP8P40818 1118 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 GJA8P48165 433 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 TRPC1P48995 793 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 FLT3LGP49771 235 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 FXR1P51114 621 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 GSTO1P78417 241 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 ADCY2Q08462 1091 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 BMS1Q14692 1282 aaKnown RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SHROOM1Q2M3G4 852 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 TSR1Q2NL82 804 aaKnown RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 TNNI3KQ59H18 835 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 ADGRA1Q86SQ6 560 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SUGP1Q8IWZ8 645 aaKnown RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 IQCF2Q8IXL9 164 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 EFCAB13Q8IY85 973 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SLAIN1Q8ND83 568 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 ANKRD20A12PQ8NF67 263 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 MYRIPQ8NFW9 859 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SSH3Q8TE77 659 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SH3RF3Q8TEJ3 882 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 GBP4Q96PP9 640 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SH3GL3Q99963 347 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 MMTAG2Q9BU76 263 aaKnown RBP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 DNAJC18Q9H819 358 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRA2B-211ENST00000477939 GOPCQ9HD26 462 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 SNRKQ9NRH2 765 aa6.8□□□□□ -1.32
TRA2B-211ENST00000477939 AATFQ9NY61 560 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms