RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EHD2Q9NZN4 543 aa11□□□□□ -0.65
CMC1-209ENST00000477739 BCCIPQ9P287 314 aaKnown RBP eCLIP11□□□□□ -0.65
CMC1-209ENST00000477739 DEXIO95424 95 aa11□□□□□ -0.65
CMC1-209ENST00000477739 PICALMQ13492 652 aa11□□□□□ -0.65
CMC1-209ENST00000477739 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
CMC1-209ENST00000477739 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
CMC1-209ENST00000477739 ABCC12Q96J65 1359 aa11□□□□□ -0.65
CMC1-209ENST00000477739 PNKPQ96T60 521 aa11□□□□□ -0.65
CMC1-209ENST00000477739 LCMT1Q9UIC8 334 aa11□□□□□ -0.65
CMC1-209ENST00000477739 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
CMC1-209ENST00000477739 H3BQF6 201 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 BUB1O43683 1085 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ERLIN1O75477 346 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 KLRK1P26718 216 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ITPK1Q13572 414 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 PTPAQ15257 358 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 TRIM65Q6PJ69 517 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 RUFY1Q96T51 708 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 DUSP10Q9Y6W6 482 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 BCL9O00512 1426 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 VSNL1P62760 191 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 LRRC41Q15345 812 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 TYW1BQ6NUM6 668 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 NBPF5PQ86XG9 351 aaPredicted RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 SMARCC1Q92922 1105 aaPredicted RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 CDK5RAP3Q96JB5 506 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ZNHIT6Q9NWK9 470 aaKnown RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 ADAM21Q9UKJ8 722 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 EFCAB8A8MWE9 144 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 USP17L8P0C7I0 530 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 CRACR2BQ8N4Y2 399 aaPredicted RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 IPO4Q8TEX9 1081 aaKnown RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 PAGE5Q96GU1 130 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 ZNF512BQ96KM6 892 aaPredicted RBP10.99□□□□□ -0.65
CMC1-209ENST00000477739 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 COL18A1P39060 1754 aa10.99□□□□□ -0.65
CMC1-209ENST00000477739 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 ADAMTS3O15072 1205 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 AKR1B10O60218 316 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 TXKP42681 527 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 C2orf54Q08AI8 447 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 MLKLQ8NB16 471 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 NGLY1Q96IV0 654 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 SLC39A2Q9NP94 309 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 KCNJ18B7U540 433 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 PRDX5P30044 214 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 LIFRP42702 1097 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 KCNJ12Q14500 433 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 KRT31Q15323 416 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 MAPKAPK5Q8IW41 473 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 GPATCH11Q8N954 259 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 HGSO14964 777 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 TBC1D8O95759 1140 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 FGFR2P21802 821 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 DPYDQ12882 1025 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 MORC3Q14149 939 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 CDCA7Q9BWT1 371 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 TSPYL1Q9H0U9 437 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 HSD3B7Q9H2F3 369 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 KAT14Q9H8E8 782 aa10.98□□□□□ -0.65
CMC1-209ENST00000477739 FBXO2Q9UK22 296 aaPredicted RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 LUC7L2Q9Y383 392 aaKnown RBP10.98□□□□□ -0.65
CMC1-209ENST00000477739 WDR19Q8NEZ3 1342 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 H0YHG0 523 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 CAMTA2O94983 1202 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 TBC1D8BQ0IIM8 1120 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 NELFCDQ8IXH7 590 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 NAPGQ99747 312 aaPredicted RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 ADAMTS7Q9UKP4 1686 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 IKBKBO14920 756 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 EIF3JO75822 258 aaKnown RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 TFAP4Q01664 338 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 PAK1Q13153 545 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 ENAHQ8N8S7 591 aaPredicted RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
CMC1-209ENST00000477739 SAMM50Q9Y512 469 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 ESYT3A0FGR9 886 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 IFNAR1P17181 557 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 TECP42680 631 aa10.97□□□□□ -0.65
CMC1-209ENST00000477739 PLCD1P51178 756 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms