RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 NOS2P35228 1153 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 CCT4P50991 539 aaKnown RBP7.92□□□□□ -1.14
LINC00173-202ENST00000477702 PSMA6P60900 246 aaKnown RBP7.92□□□□□ -1.14
LINC00173-202ENST00000477702 TEAD4Q15561 434 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 KRT24Q2M2I5 525 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 CFAP100Q494V2 611 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 C17orf99Q6UX52 265 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 TAS1R3Q7RTX0 852 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 FAM122AQ96E09 287 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 SEPT3Q9UH03 358 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 MINPP1Q9UNW1 487 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 ZNF232Q9UNY5 417 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 SERTM1A2A2V5 107 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 MMP14P50281 582 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 RBM5P52756 815 aaKnown RBP eCLIP7.91□□□□□ -1.14
LINC00173-202ENST00000477702 NAA30Q147X3 362 aaPredicted RBP7.91□□□□□ -1.14
LINC00173-202ENST00000477702 NFE2L2Q16236 605 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
LINC00173-202ENST00000477702 NECAB2Q7Z6G3 386 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 ZBTB38Q8NAP3 1195 aaPredicted RBP7.91□□□□□ -1.14
LINC00173-202ENST00000477702 MAFAQ8NHW3 353 aaPredicted RBP7.91□□□□□ -1.14
LINC00173-202ENST00000477702 GABRQQ9UN88 632 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 JAG2Q9Y219 1238 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 CSADQ9Y600 493 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
LINC00173-202ENST00000477702 TMEM265A0A087WTH1 108 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 ADCY3O60266 1144 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 PDE8AO60658 829 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 NEFMP07197 916 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 PTSQ03393 145 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 SNAPC2Q13487 334 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 CDX2Q99626 313 aaPredicted RBP7.9□□□□□ -1.14
LINC00173-202ENST00000477702 TMEM39BQ9GZU3 492 aa7.9□□□□□ -1.14
LINC00173-202ENST00000477702 TCP10L2B9ZVM9 353 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 PDHXO00330 501 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 HSP90B1P14625 803 aaKnown RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 PDE4CQ08493 712 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 TRIM28Q13263 835 aaKnown RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 FAM109BQ6ICB4 259 aaPredicted RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 ZKSCAN4Q969J2 545 aaPredicted RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 TEPSINQ96N21 525 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 CDC5LQ99459 802 aaKnown RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 SAP130Q9H0E3 1048 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 GPAMQ9HCL2 828 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 ZCCHC17Q9NP64 241 aaKnown RBP7.89□□□□□ -1.15
LINC00173-202ENST00000477702 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 SNCAIPQ9Y6H5 919 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 PIEZO1Q92508 2521 aa7.89□□□□□ -1.15
LINC00173-202ENST00000477702 NCOR1O75376 2440 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 ADGRA2Q96PE1 1338 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 SNAP23O00161 211 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 BRD1O95696 1058 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 PPP2R1AP30153 589 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 FLT3LGP49771 235 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 FCGRTP55899 365 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 STAG2Q8N3U4 1231 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.88□□□□□ -1.15
LINC00173-202ENST00000477702 MYD88Q99836 296 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 PHACTR1Q9C0D0 580 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 GREM2Q9H772 168 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 TDRD3Q9H7E2 651 aaKnown RBP7.88□□□□□ -1.15
LINC00173-202ENST00000477702 CD209Q9NNX6 404 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 PAK6Q9NQU5 681 aaPredicted RBP7.88□□□□□ -1.15
LINC00173-202ENST00000477702 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
LINC00173-202ENST00000477702 ZNF70Q9UC06 446 aaPredicted RBP7.88□□□□□ -1.15
LINC00173-202ENST00000477702 LEMD3Q9Y2U8 911 aa7.88□□□□□ -1.15
LINC00173-202ENST00000477702 MUC3AQ02505 3323 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 PCCAP05165 728 aaPredicted RBP7.87□□□□□ -1.15
LINC00173-202ENST00000477702 ATP4AP20648 1035 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 MSX1P28360 303 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 KCNJ4P48050 445 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 CTSWP56202 376 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 TNFAIP1Q13829 316 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 ALDH16A1Q8IZ83 802 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 MYLIPQ8WY64 445 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 WRNIP1Q96S55 665 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 PLEKHF1Q96S99 279 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 GAS2L1Q99501 681 aaPredicted RBP7.87□□□□□ -1.15
LINC00173-202ENST00000477702 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
LINC00173-202ENST00000477702 SPEF2Q9C093 1822 aa7.87□□□□□ -1.15
LINC00173-202ENST00000477702 SLC35F4A4IF30 521 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 CYP2C8P10632 490 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 SERPINB4P48594 390 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 CACNB3P54284 484 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 MAP3K12Q12852 859 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 PPIL2Q13356 520 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 MTMR3Q13615 1198 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 ANKRD23Q86SG2 305 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 C1orf216Q8TAB5 229 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 VTI1AQ96AJ9 217 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC00173-202ENST00000477702 C11orf49Q9H6J7 331 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 RUBCNLQ9H714 662 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 ANO2Q9NQ90 1003 aa7.86□□□□□ -1.15
LINC00173-202ENST00000477702 CWC25Q9NXE8 425 aaPredicted RBP7.86□□□□□ -1.15
LINC00173-202ENST00000477702 LRFN2Q9ULH4 789 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms