RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GTF2A2P52657 109 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 CCT2P78371 535 aaKnown RBP18.88■□□□□ 0.61
VHL-203ENST00000477538 RTN1Q16799 776 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 HSCBQ8IWL3 235 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 FANCBQ8NB91 859 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 CCDC102AQ96A19 550 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 NUP88Q99567 741 aaPredicted RBP18.88■□□□□ 0.61
VHL-203ENST00000477538 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
VHL-203ENST00000477538 SH2B1Q9NRF2 756 aaPredicted RBP18.88■□□□□ 0.61
VHL-203ENST00000477538 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
VHL-203ENST00000477538 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
VHL-203ENST00000477538 RASSF10A6NK89 507 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 WDR46O15213 610 aaKnown RBP18.87■□□□□ 0.61
VHL-203ENST00000477538 PFKFB2O60825 505 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 BMP3P12645 472 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 VCAM1P19320 739 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 KIF5BP33176 963 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 ZNF543Q08ER8 600 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 DEFB115Q30KQ5 88 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 FRMPD2Q68DX3 1309 aaPredicted RBP18.87■□□□□ 0.61
VHL-203ENST00000477538 GADL1Q6ZQY3 521 aa18.87■□□□□ 0.61
VHL-203ENST00000477538 PROCA1Q8NCQ7 364 aaPredicted RBP18.87■□□□□ 0.61
VHL-203ENST00000477538 FAM155AB1AL88 458 aaPredicted RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 GOLGA8HP0CJ92 632 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 CETPP11597 493 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 CYP4F22Q6NT55 531 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 KCTD1Q719H9 257 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 FASTKD5Q7L8L6 764 aaKnown RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 TMX3Q96JJ7 454 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 MS4A4AQ96JQ5 239 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 NCOA5Q9HCD5 579 aaKnown RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 GPCPD1Q9NPB8 672 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 RBM28Q9NW13 759 aaKnown RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
VHL-203ENST00000477538 A0A0G2JMZ2 1700 aa18.86■□□□□ 0.61
VHL-203ENST00000477538 CCL15-CCL14A0A0B4J2E2 113 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
VHL-203ENST00000477538 CDC27P30260 824 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 ANP32AP39687 249 aaKnown RBP18.85■□□□□ 0.61
VHL-203ENST00000477538 SCRN1Q12765 414 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 MOGSQ13724 837 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 CCL15Q16663 113 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 STAG2Q8N3U4 1231 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
VHL-203ENST00000477538 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
VHL-203ENST00000477538 FAM217BQ9NTX9 383 aaPredicted RBP18.85■□□□□ 0.61
VHL-203ENST00000477538 MANSC4A6NHS7 340 aaPredicted RBP18.84■□□□□ 0.61
VHL-203ENST00000477538 C1QTNF8P60827 252 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 GRM1Q13255 1194 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 TANGO6Q9C0B7 1094 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 AGTPBP1Q9UPW5 1226 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
VHL-203ENST00000477538 TMEM232C9JQI7 657 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 PLEKHA8P1O95397 391 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 ADD1P35611 737 aaKnown RBP18.83■□□□□ 0.6
VHL-203ENST00000477538 GNAQP50148 359 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 ST3GAL1Q11201 340 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 IKQ13123 557 aaPredicted RBP18.83■□□□□ 0.6
VHL-203ENST00000477538 TTBK2Q6IQ55 1244 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 TMTC3Q6ZXV5 915 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 CCDC83Q8IWF9 413 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 BRI3BPQ8WY22 251 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 CAPNS2Q96L46 248 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 FEM1BQ9UK73 627 aa18.83■□□□□ 0.6
VHL-203ENST00000477538 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 CPLX1O14810 134 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 DHX16O60231 1041 aaKnown RBP18.82■□□□□ 0.6
VHL-203ENST00000477538 STAT2P52630 851 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 HTRA3P83110 453 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 BECN1Q14457 450 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 CHURC1Q8WUH1 139 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 LZTS2Q9BRK4 669 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
VHL-203ENST00000477538 RBBP6Q7Z6E9 1792 aaKnown RBP18.81■□□□□ 0.6
VHL-203ENST00000477538 TESPA1A2RU30 521 aaPredicted RBP18.81■□□□□ 0.6
VHL-203ENST00000477538 FLOT1O75955 427 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 HSPA6P17066 643 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 SLC16A2P36021 539 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 NOGQ13253 232 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
VHL-203ENST00000477538 GPAT2Q6NUI2 795 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms