RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 MB21D1Q8N884 522 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 ENAHQ8N8S7 591 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-205ENST00000477508 ZNF296Q8WUU4 475 aaPredicted RBP15.41■□□□□ 0.06
TOP3A-205ENST00000477508 DCAF4Q8WV16 495 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 NEK1Q96PY6 1258 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 ZKSCAN3Q9BRR0 538 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 CPA4Q9UI42 421 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 TAF6LQ9Y6J9 622 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 TNKSO95271 1327 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
TOP3A-205ENST00000477508 SLC1A4P43007 532 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 FAM83BQ5T0W9 1011 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 IFIT1BQ5T764 474 aaKnown RBP15.4■□□□□ 0.06
TOP3A-205ENST00000477508 COL13A1Q5TAT6 717 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-205ENST00000477508 CYB5R4Q7L1T6 521 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
TOP3A-205ENST00000477508 TMTC2Q8N394 836 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 TMEM87BQ96K49 555 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 FEM1BQ9UK73 627 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
TOP3A-205ENST00000477508 PLA2G6O60733 806 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 GNRH1P01148 92 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 FDX1P10109 184 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 PSMA5P28066 241 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 DSG3P32926 999 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 SEC23AQ15436 765 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
TOP3A-205ENST00000477508 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 GPRC5AQ8NFJ5 357 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 NKX2-3Q8TAU0 364 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
TOP3A-205ENST00000477508 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 SPDYE16A6NNV3 312 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-205ENST00000477508 PRC1O43663 620 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 STAT2P52630 851 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 CCNA1P78396 465 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 LACTBP83111 547 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-205ENST00000477508 WTAPQ15007 396 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 TMEM67Q5HYA8 995 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
TOP3A-205ENST00000477508 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
TOP3A-205ENST00000477508 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 ANKRD13CQ8N6S4 541 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-205ENST00000477508 SLF1Q9BQI6 1058 aa15.38■□□□□ 0.05
TOP3A-205ENST00000477508 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 PDHBP11177 359 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 LIFRP42702 1097 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 ERVK-24P63145 666 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 IGDCC4Q8TDY8 1250 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 RBPJLQ9UBG7 517 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
TOP3A-205ENST00000477508 ADAMTS5Q9UNA0 930 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 SNX14Q9Y5W7 946 aa15.37■□□□□ 0.05
TOP3A-205ENST00000477508 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 HOXD10P28358 340 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 FCGRTP55899 365 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 ANTXR2P58335 489 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 ANAPC15P60006 121 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-205ENST00000477508 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
TOP3A-205ENST00000477508 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 CATIPQ7Z7H3 387 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
TOP3A-205ENST00000477508 PAGR1Q9BTK6 254 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
TOP3A-205ENST00000477508 CTDP1Q9Y5B0 961 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-205ENST00000477508 RLFQ13129 1914 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 VWA5AO00534 786 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 ZBED4O75132 1171 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 MAPK4P31152 587 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 COPB2P35606 906 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 PRMT2P55345 433 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 EXOSC10Q01780 885 aaKnown RBP15.35■□□□□ 0.05
TOP3A-205ENST00000477508 ZNF543Q08ER8 600 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 ADCK5Q3MIX3 580 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 BLOC1S2Q6QNY1 142 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 CTU1Q7Z7A3 348 aaKnown RBP15.35■□□□□ 0.05
TOP3A-205ENST00000477508 CD99L2Q8TCZ2 262 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 ATG4CQ96DT6 458 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 JAKMIP1Q96N16 626 aaKnown RBP15.35■□□□□ 0.05
TOP3A-205ENST00000477508 TM6SF1Q9BZW5 370 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 TXNRD2Q9NNW7 524 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
TOP3A-205ENST00000477508 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
TOP3A-205ENST00000477508 SH2B2O14492 632 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms