RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
COL27A1-204ENST00000477421 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 TRIM37O94972 964 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 KIF20AO95235 890 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 SP4Q02446 784 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 GRIN1Q05586 938 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 MORC3Q14149 939 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 IQCB1Q15051 598 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 SPATA1Q5VX52 437 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 RIMS1Q86UR5 1692 aaKnown RBP12.36□□□□□ -0.43
COL27A1-204ENST00000477421 H0YHG0 523 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 PTPREP23469 700 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 PLA2G4DQ86XP0 818 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 KCNB2Q92953 911 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 COA7Q96BR5 231 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 CWC15Q9P013 229 aaKnown RBP12.36□□□□□ -0.43
COL27A1-204ENST00000477421 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 ADCY7P51828 1080 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 CHMP4BP1P59074 171 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 DHX40Q8IX18 779 aaKnown RBP12.36□□□□□ -0.43
COL27A1-204ENST00000477421 DPF2Q92785 391 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
COL27A1-204ENST00000477421 OGFRQ9NZT2 677 aa12.36□□□□□ -0.43
COL27A1-204ENST00000477421 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 KRT83P78385 493 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 NEK11Q8NG66 645 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 IKBKBO14920 756 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 PTPROQ16827 1216 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 ZNF34Q8IZ26 560 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 KCTD17Q8N5Z5 321 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 BCCIPQ9P287 314 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL27A1-204ENST00000477421 GOLGA6L10A6NI86 522 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 DDAH1O94760 285 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 SERPINB2P05120 415 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 CACNB3P54284 484 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 WDR78Q5VTH9 848 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 GDAQ9Y2T3 454 aa12.35□□□□□ -0.43
COL27A1-204ENST00000477421 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 PP2D1A8MPX8 630 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 RESP18Q5W5W9 173 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 PIGSQ96S52 555 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
COL27A1-204ENST00000477421 COL15A1P39059 1388 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 TACC1O75410 805 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 KLRK1P26718 216 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 RBL2Q08999 1139 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 SPICE1Q8N0Z3 855 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
COL27A1-204ENST00000477421 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
COL27A1-204ENST00000477421 PAGE5Q96GU1 130 aa12.34□□□□□ -0.43
COL27A1-204ENST00000477421 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.43
COL27A1-204ENST00000477421 FAM196BA6NMK8 535 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 ENC1O14682 589 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 CFBP00751 764 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 METTL16Q86W50 562 aaKnown RBP12.33□□□□□ -0.44
COL27A1-204ENST00000477421 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
COL27A1-204ENST00000477421 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL27A1-204ENST00000477421 VPS18Q9P253 973 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
COL27A1-204ENST00000477421 XDHP47989 1333 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
COL27A1-204ENST00000477421 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 LRRC41Q15345 812 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 C2CD5Q86YS7 1000 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 GSDMAQ96QA5 445 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 DDX39AO00148 427 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms