RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KIR2DL1P43626 348 aaPredicted RBP5.51□□□□□ -1.53
XRN1-211ENST00000477237 KIR2DL2P43627 348 aaPredicted RBP5.51□□□□□ -1.53
XRN1-211ENST00000477237 NCKAP1LP55160 1127 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 ADAM17P78536 824 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 OLFML2BQ68BL8 750 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 SV2BQ7L1I2 683 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 TMC6Q7Z403 805 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 SRRDQ9UH36 339 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 ADAM30Q9UKF2 790 aa5.51□□□□□ -1.53
XRN1-211ENST00000477237 BUB1BO60566 1050 aaPredicted RBP5.5□□□□□ -1.53
XRN1-211ENST00000477237 PDE4BQ07343 736 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 KIR3DS1Q14943 382 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 WAPLQ7Z5K2 1190 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 TXNDC2Q86VQ3 553 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 HHIPL1Q96JK4 782 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 SORCS2Q96PQ0 1159 aa5.5□□□□□ -1.53
XRN1-211ENST00000477237 TREHO43280 583 aa5.49□□□□□ -1.53
XRN1-211ENST00000477237 CLEC16AQ2KHT3 1053 aa5.49□□□□□ -1.53
XRN1-211ENST00000477237 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
XRN1-211ENST00000477237 TMEM82A0PJX8 343 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 GIPC1O14908 333 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 MPOP05164 745 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 USP17L7P0C7H9 530 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 RPS26P62854 115 aaKnown RBP5.48□□□□□ -1.53
XRN1-211ENST00000477237 CAP1Q01518 475 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 RNF111Q6ZNA4 994 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 ADGRG2Q8IZP9 1017 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 CCDC82Q8N4S0 544 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 FBF1Q8TES7 1133 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 KREMEN1Q96MU8 473 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 FOXP3Q9BZS1 431 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 CORINQ9Y5Q5 1042 aa5.48□□□□□ -1.53
XRN1-211ENST00000477237 LIMS1P48059 325 aa5.47□□□□□ -1.53
XRN1-211ENST00000477237 NT5DC1Q5TFE4 455 aa5.47□□□□□ -1.53
XRN1-211ENST00000477237 ZPBP2Q6X784 338 aa5.47□□□□□ -1.53
XRN1-211ENST00000477237 FAM13CQ8NE31 585 aa5.47□□□□□ -1.53
XRN1-211ENST00000477237 SCAND2PQ9GZW5 306 aaPredicted RBP5.47□□□□□ -1.53
XRN1-211ENST00000477237 TTF2Q9UNY4 1162 aaKnown RBP5.47□□□□□ -1.53
XRN1-211ENST00000477237 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 IGFBP6P24592 240 aaPredicted RBP5.46□□□□□ -1.54
XRN1-211ENST00000477237 RTP1P59025 263 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 SPATA25Q9BR10 227 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 ASPNQ9BXN1 380 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 C12orf49Q9H741 205 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 SMPD4Q9NXE4 827 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 FAM8A1Q9UBU6 413 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 DCTN4Q9UJW0 460 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 USTQ9Y2C2 406 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 DUSP10Q9Y6W6 482 aa5.46□□□□□ -1.54
XRN1-211ENST00000477237 LMNB1P20700 586 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 HMGA2P52926 109 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 VWA3BQ502W6 1294 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 AGMOQ6ZNB7 445 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 LSRQ86X29 649 aaPredicted RBP5.45□□□□□ -1.54
XRN1-211ENST00000477237 SYTL5Q8TDW5 730 aaPredicted RBP5.45□□□□□ -1.54
XRN1-211ENST00000477237 MENTQ9BUN1 341 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 HDAC8Q9BY41 377 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 WWC3Q9ULE0 1092 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 IRS2Q9Y4H2 1338 aa5.45□□□□□ -1.54
XRN1-211ENST00000477237 NUDT19A8MXV4 375 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 C1QTNF3-AMACRE9PGA6 284 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 ITGB3P05106 788 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 PLCG1P19174 1290 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 MAPK8P45983 427 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 TNNI2P48788 182 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 YARSP54577 528 aaKnown RBP5.44□□□□□ -1.54
XRN1-211ENST00000477237 RPL6Q02878 288 aaKnown RBP5.44□□□□□ -1.54
XRN1-211ENST00000477237 TMEM62Q0P6H9 643 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 NMIQ13287 307 aaPredicted RBP5.44□□□□□ -1.54
XRN1-211ENST00000477237 HSF5Q4G112 596 aaPredicted RBP5.44□□□□□ -1.54
XRN1-211ENST00000477237 LIPIQ6XZB0 460 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 RETREG2Q8NC44 543 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 ENOX1Q8TC92 643 aaKnown RBP5.44□□□□□ -1.54
XRN1-211ENST00000477237 TCTN2Q96GX1 697 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 TCFL5Q9UL49 500 aa5.44□□□□□ -1.54
XRN1-211ENST00000477237 FADS2P1A8MWK0 482 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 FKTNO75072 461 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 CBX2Q14781 532 aaPredicted RBP5.43□□□□□ -1.54
XRN1-211ENST00000477237 TSNAXIP1Q2TAA8 658 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 BBS9Q3SYG4 887 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 CPZQ66K79 652 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 GALNT18Q6P9A2 607 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 RPTNQ6XPR3 784 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 SLFN12Q8IYM2 578 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 NLGN1Q8N2Q7 840 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 DDX1Q92499 740 aaKnown RBP5.43□□□□□ -1.54
XRN1-211ENST00000477237 RBM15Q96T37 977 aaKnown RBP eCLIP5.43□□□□□ -1.54
XRN1-211ENST00000477237 MIR1-1HGQ9H1L0 117 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 SUSD2Q9UGT4 822 aa5.43□□□□□ -1.54
XRN1-211ENST00000477237 SOWAHDA6NJG2 315 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 SLPIP03973 132 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
XRN1-211ENST00000477237 TFE3P19532 575 aaPredicted RBP5.42□□□□□ -1.54
XRN1-211ENST00000477237 CNR2P34972 360 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 ARL4AP40617 200 aa5.42□□□□□ -1.54
XRN1-211ENST00000477237 CCDC85BQ15834 202 aaPredicted RBP5.42□□□□□ -1.54
XRN1-211ENST00000477237 MAP3K11Q16584 847 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms