RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RNF180Q86T96 592 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 CLUAP1Q96AJ1 413 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 BCAR3O75815 825 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 FLOT1O75955 427 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 TMEM132BQ14DG7 1078 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 ANKRD33Q7Z3H0 272 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 SIAH1Q8IUQ4 282 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 ROBO3Q96MS0 1386 aa13.81□□□□□ -0.2
BRCA1-213ENST00000476777 TRANK1O15050 2925 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 SLC25A27O95847 323 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 PGK2P07205 417 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 ZNF865P0CJ78 1059 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-213ENST00000476777 ZNF792Q3KQV3 632 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-213ENST00000476777 MCM9Q9NXL9 1143 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
BRCA1-213ENST00000476777 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 NAV1Q8NEY1 1877 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 TIMP1P01033 207 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 AKR1A1P14550 325 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 CLEC10AQ8IUN9 316 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 SLC44A5Q8NCS7 719 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-213ENST00000476777 MMP19Q99542 508 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
BRCA1-213ENST00000476777 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
BRCA1-213ENST00000476777 VCPKMTQ9H867 229 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 DIS3Q9Y2L1 958 aaKnown RBP13.79□□□□□ -0.2
BRCA1-213ENST00000476777 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
BRCA1-213ENST00000476777 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 CYP2D6P10635 497 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 ACLYP53396 1101 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 AKNAD1Q5T1N1 836 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 RIOX2Q8IUF8 465 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 ATXN2LQ8WWM7 1075 aaKnown RBP13.78□□□□□ -0.2
BRCA1-213ENST00000476777 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
BRCA1-213ENST00000476777 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-213ENST00000476777 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
BRCA1-213ENST00000476777 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-213ENST00000476777 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.21
BRCA1-213ENST00000476777 AKR1B1P15121 316 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 PDE6AP16499 860 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 PBX2P40425 430 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 ICA1Q05084 483 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 KCTD2Q14681 263 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 RASIP1Q5U651 963 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 CCSAPQ6IQ19 270 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-213ENST00000476777 MFSD5Q6N075 450 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 SDR42E1Q8WUS8 393 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 PPM1EQ8WY54 764 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 GAS2L1Q99501 681 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-213ENST00000476777 SH2D4AQ9H788 454 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 ARHGEF10LQ9HCE6 1279 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
BRCA1-213ENST00000476777 SYNRGQ9UMZ2 1314 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 MOXD2PA6NHM9 499 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 VWA5AO00534 786 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 STAT3P40763 770 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 KCNA10Q16322 511 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 ADAMTS19Q8TE59 1207 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 PRDM12Q9H4Q4 367 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 FBXO28Q9NVF7 368 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 THEGQ9P2T0 379 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-213ENST00000476777 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
BRCA1-213ENST00000476777 MYH8P13535 1937 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 CDK7P50613 346 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 PPIGQ13427 754 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■■■■□ 20.9
BRCA1-213ENST00000476777 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-213ENST00000476777 AACSQ86V21 672 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 LCORLQ8N3X6 602 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms