RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
CCNL1-217ENST00000476367 NT5C2P49902 561 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 KLRC3Q07444 240 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 FAM83BQ5T0W9 1011 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 DHX32Q7L7V1 743 aaKnown RBP16.91■□□□□ 0.3
CCNL1-217ENST00000476367 UBAC1Q9BSL1 405 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 LY9Q9HBG7 655 aa16.91■□□□□ 0.3
CCNL1-217ENST00000476367 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
CCNL1-217ENST00000476367 FKTNO75072 461 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 MCCP23508 829 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 MCM5P33992 734 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 HERVK_113P62684 666 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 TTC14Q96N46 770 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 P2RX7Q99572 595 aaKnown RBP16.9■□□□□ 0.3
CCNL1-217ENST00000476367 TMEM47Q9BQJ4 181 aa16.9■□□□□ 0.3
CCNL1-217ENST00000476367 FLOT1O75955 427 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 SP3Q02447 781 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 GMCL1P1Q8NEA9 526 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 SYNPO2Q9UMS6 1093 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 WDR19Q8NEZ3 1342 aa16.89■□□□□ 0.29
CCNL1-217ENST00000476367 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 PEX10O60683 326 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 BCRP11274 1271 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 DGKHQ86XP1 1220 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 CD99L2Q8TCZ2 262 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 FBXO28Q9NVF7 368 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
CCNL1-217ENST00000476367 BLOC1S2Q6QNY1 142 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 MTA3Q9BTC8 594 aa16.88■□□□□ 0.29
CCNL1-217ENST00000476367 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
CCNL1-217ENST00000476367 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
CCNL1-217ENST00000476367 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
CCNL1-217ENST00000476367 CCDC178Q5BJE1 867 aa16.87■□□□□ 0.29
CCNL1-217ENST00000476367 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
CCNL1-217ENST00000476367 BAZ2BQ9UIF8 2168 aaKnown RBP16.86■□□□□ 0.29
CCNL1-217ENST00000476367 PSMA5P28066 241 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 LIFRP42702 1097 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 SLC1A4P43007 532 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 COG2Q14746 738 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 IFIT1BQ5T764 474 aaKnown RBP16.86■□□□□ 0.29
CCNL1-217ENST00000476367 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 SGMS1Q86VZ5 419 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 ATG4CQ96DT6 458 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 TMEM87BQ96K49 555 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 ARHGAP39Q9C0H5 1083 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 SMCHD1A6NHR9 2005 aa16.86■□□□□ 0.29
CCNL1-217ENST00000476367 ERICH2A1L162 156 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 SNHG28P0DPA3 235 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 BMP3P12645 472 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 CAP1Q01518 475 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 TROAPQ12815 778 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 Q6ZUG5 572 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 PNMA1Q8ND90 353 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 GMCL1Q96IK5 515 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 CYP46A1Q9Y6A2 500 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 DOCK3Q8IZD9 2030 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 EVCP57679 992 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 KIF22Q14807 665 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 GTF3C2Q8WUA4 911 aaPredicted RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 SLF1Q9BQI6 1058 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
CCNL1-217ENST00000476367 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
CCNL1-217ENST00000476367 FRMPD2Q68DX3 1309 aaPredicted RBP16.84■□□□□ 0.29
CCNL1-217ENST00000476367 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 PDHBP11177 359 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 DSG3P32926 999 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 ERVK-24P63145 666 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 WTAPQ15007 396 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 COL13A1Q5TAT6 717 aaPredicted RBP16.84■□□□□ 0.29
CCNL1-217ENST00000476367 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 KIFC2Q96AC6 838 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
CCNL1-217ENST00000476367 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
CCNL1-217ENST00000476367 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms