RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
EXOSC1-208ENST00000476234 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-208ENST00000476234 MAML3Q96JK9 1138 aa13.39□□□□□ -0.27
EXOSC1-208ENST00000476234 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
EXOSC1-208ENST00000476234 PRUNE2Q8WUY3 3088 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 ROBO3Q96MS0 1386 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 GOLIM4O00461 696 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 HMMRO75330 724 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 PDE6AP16499 860 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 ITGB8P26012 769 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 TACC3Q9Y6A5 838 aa13.38□□□□□ -0.27
EXOSC1-208ENST00000476234 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 KIAA0355O15063 1070 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 IFIT2P09913 472 aaKnown RBP13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 EPHB4P54760 987 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 TANGO6Q9C0B7 1094 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
EXOSC1-208ENST00000476234 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 FOSL2P15408 326 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 ATP5JP18859 108 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 SYMPKQ92797 1274 aaKnown RBP13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 XPNPEP3Q9NQH7 507 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 TMX2Q9Y320 296 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 PARP14Q460N5 1801 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
EXOSC1-208ENST00000476234 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 SLC25A27O95847 323 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 CLTBP09497 229 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 FCER1AP12319 257 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 LCORLQ8N3X6 602 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 HAUS7Q99871 368 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 PAG1Q9NWQ8 432 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 MCM9Q9NXL9 1143 aa13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
EXOSC1-208ENST00000476234 PRKAB2O43741 272 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 FLOT1O75955 427 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 CYP2D6P10635 497 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 RARBP10826 455 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 TTF1Q15361 905 aaPredicted RBP13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 ZNF792Q3KQV3 632 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 RNF180Q86T96 592 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 SDR42E1Q8WUS8 393 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 TINF2Q9BSI4 451 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 CRNKL1Q9BZJ0 848 aaKnown RBP13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 LRRCC1Q9C099 1032 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
EXOSC1-208ENST00000476234 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 A0A1W2PQ45 241 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 A0A1W2PQY0 241 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 RAG1P15918 1043 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 ADD2P35612 726 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 FAAP100Q0VG06 881 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 SLC44A5Q8NCS7 719 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 SMCHD1A6NHR9 2005 aa13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
EXOSC1-208ENST00000476234 PGK1P00558 417 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 FPGSQ05932 587 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 PLS1Q14651 629 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms