RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 ZKSCAN2Q63HK3 967 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
CALD1-217ENST00000475772 C11orf49Q9H6J7 331 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 IGSF3O75054 1194 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 GH2P01242 217 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 COL6A1P12109 1028 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 CYP7A1P22680 504 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 CCND3P30281 292 aaPredicted RBP12.75□□□□□ -0.37
CALD1-217ENST00000475772 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
CALD1-217ENST00000475772 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
CALD1-217ENST00000475772 C12orf42Q96LP6 360 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 FLRT1Q9NZU1 646 aa12.75□□□□□ -0.37
CALD1-217ENST00000475772 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
CALD1-217ENST00000475772 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 MAPK4P31152 587 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 SLC4A3P48751 1232 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
CALD1-217ENST00000475772 RLFQ13129 1914 aa12.74□□□□□ -0.37
CALD1-217ENST00000475772 SMCHD1A6NHR9 2005 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
CALD1-217ENST00000475772 IGHA2P01877 340 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
CALD1-217ENST00000475772 PLCD1P51178 756 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
CALD1-217ENST00000475772 NYAP1Q6ZVC0 841 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 SOCS4Q8WXH5 440 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 BTBD7Q9P203 1132 aa12.73□□□□□ -0.37
CALD1-217ENST00000475772 USP17L15C9J2P7 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L13C9JLJ4 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L11C9JVI0 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L18D6R9N7 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L22D6RA61 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L17D6RBQ6 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L19D6RCP7 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L20D6RJB6 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 IDH1O75874 414 aaKnown RBP12.72□□□□□ -0.37
CALD1-217ENST00000475772 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 SHMT1P34896 483 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 CLCN1P35523 988 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 USP17L24Q0WX57 530 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
CALD1-217ENST00000475772 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 LRIT3Q3SXY7 679 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 RIOK1Q9BRS2 568 aaKnown RBP12.72□□□□□ -0.37
CALD1-217ENST00000475772 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 EHD4Q9H223 541 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
CALD1-217ENST00000475772 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
CALD1-217ENST00000475772 RGS2P41220 211 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 USP5P45974 858 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 GABPAQ06546 454 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 LBX2Q6XYB7 198 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 Q7L0L9 218 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.37
CALD1-217ENST00000475772 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
CALD1-217ENST00000475772 EDC3Q96F86 508 aaKnown RBP12.71□□□□□ -0.37
CALD1-217ENST00000475772 KIAA1683Q9H0B3 1180 aa12.71□□□□□ -0.37
CALD1-217ENST00000475772 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 VCAM1P19320 739 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 PDE3AQ14432 1141 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
CALD1-217ENST00000475772 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 APBA2Q99767 749 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
CALD1-217ENST00000475772 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 DLL1O00548 723 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 HOXC6P09630 235 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 KIAA1755Q5JYT7 1200 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 TTC6Q86TZ1 520 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
CALD1-217ENST00000475772 UNC80Q8N2C7 3258 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 USP14P54578 494 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 PDE4DQ08499 809 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 GRB14Q14449 540 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 SEPT2Q15019 361 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
CALD1-217ENST00000475772 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms