RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 RBM27Q9P2N5 1060 aaKnown RBP8.22□□□□□ -1.09
SHQ1-207ENST00000475558 SRRDQ9UH36 339 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 LHX6Q9UPM6 363 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 SNCAIPQ9Y6H5 919 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 A0A1B0GUL6 1792 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 ARAP2Q8WZ64 1704 aa8.21□□□□□ -1.09
SHQ1-207ENST00000475558 PRKAB2O43741 272 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 FMNL1O95466 1100 aaPredicted RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 CHGBP05060 677 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 AK2P54819 239 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 UBXN2AP68543 259 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 HMGN5P82970 282 aaKnown RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 PLCB2Q00722 1185 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 MTFR1Q15390 333 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SLFNL1Q499Z3 407 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 CDC42EP5Q6NZY7 148 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 Q6ZUG5 572 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ANKRD23Q86SG2 305 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ADGRA1Q86SQ6 560 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SGMS1Q86VZ5 419 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SLC17A8Q8NDX2 589 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SH3RF3Q8TEJ3 882 aaPredicted RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SDR42E1Q8WUS8 393 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ANKS1AQ92625 1134 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ZKSCAN4Q969J2 545 aaPredicted RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ZNF341Q9BYN7 854 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 EHD4Q9H223 541 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 SLKQ9H2G2 1235 aaPredicted RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 TOMM22Q9NS69 142 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 GINM1Q9NU53 330 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 ZSWIM5Q9P217 1185 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 BIN2Q9UBW5 565 aaPredicted RBP8.21□□□□□ -1.1
SHQ1-207ENST00000475558 CPA4Q9UI42 421 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
SHQ1-207ENST00000475558 A0A1W2PPC1 479 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 CCDC69A6NI79 296 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 PDHXO00330 501 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 DLL1O00548 723 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 IFIT3O14879 490 aaKnown RBP8.2□□□□□ -1.1
SHQ1-207ENST00000475558 FOXP2O15409 715 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 PRC1O43663 620 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 CDKL5O76039 1030 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
SHQ1-207ENST00000475558 CCL5P13501 91 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 OSBPP22059 807 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 GNAQP50148 359 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 CACNB3P54284 484 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 HAND2P61296 217 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 UBE2Q1Q7Z7E8 422 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 MB21D2Q8IYB1 491 aaPredicted RBP8.2□□□□□ -1.1
SHQ1-207ENST00000475558 IGDCC4Q8TDY8 1250 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 FAM151AQ8WW52 585 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 MAP3K14Q99558 947 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 RNF208Q9H0X6 261 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 PRO3102Q9H379 93 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
SHQ1-207ENST00000475558 HERC5Q9UII4 1024 aaKnown RBP8.2□□□□□ -1.1
SHQ1-207ENST00000475558 SERPINB13Q9UIV8 391 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 ATP6V1DQ9Y5K8 247 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 SLC12A7Q9Y666 1083 aa8.2□□□□□ -1.1
SHQ1-207ENST00000475558 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 TBC1D12O60347 775 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 RANBP6O60518 1105 aaKnown RBP8.19□□□□□ -1.1
SHQ1-207ENST00000475558 PFKFB2O60825 505 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 KDM4AO75164 1064 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 PTMSP20962 102 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 CTGFP29279 349 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 FCGRTP55899 365 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 WTAPQ15007 396 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 GRIK5Q16478 980 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 TMEM67Q5HYA8 995 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 NFXL1Q6ZNB6 911 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 CATIPQ7Z7H3 387 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 METTL16Q86W50 562 aaKnown RBP8.19□□□□□ -1.1
SHQ1-207ENST00000475558 WASF1Q92558 559 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
SHQ1-207ENST00000475558 LZTS2Q9BRK4 669 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 OSBPL5Q9H0X9 879 aaPredicted RBP8.19□□□□□ -1.1
SHQ1-207ENST00000475558 SYNPO2Q9UMS6 1093 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 KCNH4Q9UQ05 1017 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 SMC3Q9UQE7 1217 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 SZT2Q5T011 3432 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 MYPNQ86TC9 1320 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 ZSWIM8A7E2V4 1837 aa8.19□□□□□ -1.1
SHQ1-207ENST00000475558 B4E1Z4 1266 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CXCL11O14625 94 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 CPLX1O14810 134 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 FARP2O94887 1054 aaPredicted RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 SGPL1O95470 568 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 SMARCA1P28370 1054 aa8.18□□□□□ -1.1
SHQ1-207ENST00000475558 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
SHQ1-207ENST00000475558 INPP5BP32019 993 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms