RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNF75DP51815 510 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 METTL16Q86W50 562 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 PDGFDQ9GZP0 370 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 MYO3BQ8WXR4 1341 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 ADAMTS3O15072 1205 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 C21orf2O43822 256 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 GALNT17Q6IS24 598 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 TYW1BQ6NUM6 668 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 ELOA2Q8IYF1 753 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 ZNF830Q96NB3 372 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 BPIFA3Q9BQP9 254 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 SCN9AQ15858 1988 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 MYH8P13535 1937 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 USP17L5A8MUK1 530 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 PTGDRQ13258 359 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 ISM2Q6H9L7 571 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 DRC7Q8IY82 874 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 STXBP3O00186 592 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 ZNF500O60304 480 aaPredicted RBP17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 TPM3P06753 285 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 SHMT1P34896 483 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 ATP2C1P98194 919 aaPredicted RBP17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 TCP10Q12799 353 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 PDILTQ8N807 584 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 SERTAD1Q9UHV2 236 aa17.55■□□□□ 0.4
RPUSD3-215ENST00000475470 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 TTLL1O95922 423 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 MCM7P33993 719 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 CACNB3P54284 484 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 SARM1Q6SZW1 724 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 HOMER1Q86YM7 354 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 LRRC47Q8N1G4 583 aaKnown RBP17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 EHD4Q9H223 541 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
RPUSD3-215ENST00000475470 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 PDHBP11177 359 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 KANK3Q6NY19 840 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 ZFPM1Q8IX07 1006 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 DAGLBQ8NCG7 672 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 RASGRP4Q8TDF6 673 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 NAPAP54920 295 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 POSTNQ15063 836 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 PCDHA6Q9UN73 950 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 PCDHA8Q9Y5H6 950 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 PCDHA5Q9Y5H7 936 aa17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
RPUSD3-215ENST00000475470 VWA3AA6NCI4 1184 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 ASPRV1Q53RT3 343 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 ZSCAN29Q8IWY8 852 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 CCDC34Q96HJ3 373 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 EPSTI1Q96J88 318 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 IDI2Q9BXS1 227 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 SMTNL1A8MU46 457 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 M0R2N6 131 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 FOXN1O15353 648 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 SYMPKQ92797 1274 aaKnown RBP17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 CCDC17Q96LX7 622 aa17.52■□□□□ 0.4
RPUSD3-215ENST00000475470 TPM4P67936 248 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 DHX58Q96C10 678 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 PIGSQ96S52 555 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 ACTN4O43707 911 aaKnown RBP17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 ZMYND12Q9H0C1 365 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 RIOX1Q9H6W3 641 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 C6orf50Q9HD87 102 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 FAM198AQ9UFP1 575 aa17.51■□□□□ 0.39
RPUSD3-215ENST00000475470 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 YDJCA8MPS7 323 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 GNA11P29992 359 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 CDC25BP30305 580 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms