RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MIGA2Q7L4E1 593 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 DIS3L2Q8IYB7 885 aaKnown RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 LEO1Q8WVC0 666 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 RRP36Q96EU6 259 aaKnown RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 DEFB129Q9H1M3 183 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 ARHGEF10LQ9HCE6 1279 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 BRMS1Q9HCU9 246 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 SH3GLB2Q9NR46 395 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 CYTH3O43739 400 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 KRT2P35908 639 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 CAP2P40123 477 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 SIAH1Q8IUQ4 282 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 NOSTRINQ8IVI9 506 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 FAM177A1Q8N128 213 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GMCL1P1Q8NEA9 526 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GPT2Q8TD30 523 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 ADARB2Q9NS39 739 aaKnown RBP15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GGA3Q9NZ52 723 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
TRAF4-210ENST00000475329 SCAF8Q9UPN6 1271 aaKnown RBP15.83■□□□□ 0.12
TRAF4-210ENST00000475329 PPP2R3BQ9Y5P8 575 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 PITPNM2Q9BZ72 1349 aa15.83■□□□□ 0.12
TRAF4-210ENST00000475329 GADD45BO75293 160 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-210ENST00000475329 ASNSP08243 561 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 CALML3P27482 149 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 DCAF15Q66K64 600 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 USP28Q96RU2 1077 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 RIOX1Q9H6W3 641 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 GINM1Q9NU53 330 aa15.82■□□□□ 0.12
TRAF4-210ENST00000475329 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
TRAF4-210ENST00000475329 BTBD18B2RXH4 712 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 hCG_1984214I3L0E3 225 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 RAD21O60216 631 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 NLRP5P59047 1200 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 DPY19L2Q6NUT2 758 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 HEATR3Q7Z4Q2 680 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 ZNF713Q8N859 430 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-210ENST00000475329 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-210ENST00000475329 PHIPQ8WWQ0 1821 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
TRAF4-210ENST00000475329 GMCL1Q96IK5 515 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 CPVLQ9H3G5 476 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 GOPCQ9HD26 462 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 POLR3EQ9NVU0 708 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 RTEL1Q9NZ71 1219 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 RCOR1Q9UKL0 485 aa15.81■□□□□ 0.12
TRAF4-210ENST00000475329 OTOFQ9HC10 1997 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 PAPPA2Q9BXP8 1791 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 PHF20L1A8MW92 1017 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 F5H6K3 240 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 STXBP3O00186 592 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 YEATS4O95619 227 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 NDUFB10O96000 172 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 SLC1A4P43007 532 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 HIRAP54198 1017 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-210ENST00000475329 CEBPZQ03701 1054 aaKnown RBP15.8■□□□□ 0.12
TRAF4-210ENST00000475329 KLRC3Q07444 240 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 NBPF12Q5TAG4 269 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-210ENST00000475329 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 HOMER1Q86YM7 354 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 OXER1Q8TDS5 423 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-210ENST00000475329 ZNF341Q9BYN7 854 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRAF4-210ENST00000475329 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 BARHL2Q9NY43 387 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
TRAF4-210ENST00000475329 GOLGA6L4A6NEF3 574 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
TRAF4-210ENST00000475329 NASPP49321 788 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-210ENST00000475329 NR5A1Q13285 461 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 STK38Q15208 465 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 ANO1Q5XXA6 986 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 GALNT17Q6IS24 598 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 SYAP1Q96A49 352 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-210ENST00000475329 PIGSQ96S52 555 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 GZF1Q9H116 711 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-210ENST00000475329 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 TMX2Q9Y320 296 aa15.79■□□□□ 0.12
TRAF4-210ENST00000475329 A0A1W2PRG0 241 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
TRAF4-210ENST00000475329 NAPAP54920 295 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 NPY5RQ15761 445 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 RILPL1Q5EBL4 403 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 TTBK2Q6IQ55 1244 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 CAVIN1Q6NZI2 390 aaKnown RBP15.78■□□□□ 0.12
TRAF4-210ENST00000475329 ADGRF4Q8IZF3 695 aa15.78■□□□□ 0.12
TRAF4-210ENST00000475329 DAGLBQ8NCG7 672 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms