RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 KLRF2D3W0D1 207 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 UBE2Q2LH0YL09 131 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 FDX1P10109 184 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 CDC27P30260 824 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
IMP4-214ENST00000475074 STK3Q13188 491 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 PRRT2Q7Z6L0 340 aaPredicted RBP12.85□□□□□ -0.35
IMP4-214ENST00000475074 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 FAM160B2Q86V87 743 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 TRIM22Q8IYM9 498 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
IMP4-214ENST00000475074 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
IMP4-214ENST00000475074 CHURC1Q8WUH1 139 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
IMP4-214ENST00000475074 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
IMP4-214ENST00000475074 TMEM88BA6NKF7 163 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 PRPF3O43395 683 aaKnown RBP12.84□□□□□ -0.35
IMP4-214ENST00000475074 PDCP20941 246 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
IMP4-214ENST00000475074 FUT2Q10981 343 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 TRAF1Q13077 416 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 MTMR2Q13614 643 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
IMP4-214ENST00000475074 WASF1Q92558 559 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
IMP4-214ENST00000475074 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 PNMA2Q9UL42 364 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
IMP4-214ENST00000475074 hCG_1984214I3L0E3 225 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 IRF6O14896 467 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
IMP4-214ENST00000475074 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 RXRAP19793 462 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 STAT2P52630 851 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 HUNKP57058 714 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
IMP4-214ENST00000475074 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.366e-7■■■□□ 14.9
IMP4-214ENST00000475074 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
IMP4-214ENST00000475074 ZNF713Q8N859 430 aaPredicted RBP12.83□□□□□ -0.36
IMP4-214ENST00000475074 OTUD5Q96G74 571 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 SLC45A1Q9Y2W3 748 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 LOC285556D6RIA3 1793 aa12.83□□□□□ -0.36
IMP4-214ENST00000475074 PTPRFP10586 1907 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 PTPDC1A2A3K4 754 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 TRIM75PA6NK02 468 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 DEXIO95424 95 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 VCAM1P19320 739 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
IMP4-214ENST00000475074 GTF2A2P52657 109 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 INHBEP58166 350 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
IMP4-214ENST00000475074 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 RGMBQ6NW40 437 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 CCDC144CPQ8IYA2 1237 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
IMP4-214ENST00000475074 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
IMP4-214ENST00000475074 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
IMP4-214ENST00000475074 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
IMP4-214ENST00000475074 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 TMEM232C9JQI7 657 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 CETPP11597 493 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 HMGCS2P54868 508 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 CCDC84Q86UT8 332 aaPredicted RBP12.81□□□□□ -0.36
IMP4-214ENST00000475074 RRP36Q96EU6 259 aaKnown RBP12.81□□□□□ -0.36
IMP4-214ENST00000475074 ZCCHC17Q9NP64 241 aaKnown RBP12.81□□□□□ -0.36
IMP4-214ENST00000475074 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
IMP4-214ENST00000475074 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
IMP4-214ENST00000475074 PNMA6FA0A0J9YX94 578 aa12.8□□□□□ -0.36
IMP4-214ENST00000475074 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
IMP4-214ENST00000475074 CYTH3O43739 400 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms