RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 KRT32Q14532 448 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 SLMAPQ14BN4 828 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 PRPF40BQ6NWY9 871 aaKnown RBP4.65□□□□□ -1.66
USP16-205ENST00000474835 PDXDC2PQ6P474 469 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 BZW1Q7L1Q6 419 aaKnown RBP4.65□□□□□ -1.66
USP16-205ENST00000474835 SDCCAG8Q86SQ7 713 aaPredicted RBP4.65□□□□□ -1.66
USP16-205ENST00000474835 SGMS1Q86VZ5 419 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 TBC1D5Q92609 795 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 NECTIN2Q92692 538 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 MMS19Q96T76 1030 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 MTA3Q9BTC8 594 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 TRMT1Q9NXH9 659 aaKnown RBP4.65□□□□□ -1.66
USP16-205ENST00000474835 STK32BQ9NY57 414 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 SPG7Q9UQ90 795 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 PARP14Q460N5 1801 aa4.65□□□□□ -1.66
USP16-205ENST00000474835 SOWAHDA6NJG2 315 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 KIF5CO60282 957 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 IMPDH2P12268 514 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 PTPREP23469 700 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 PAX7P23759 505 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 PSMA5P28066 241 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 EHHADHQ08426 723 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 GPS2Q13227 327 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 TCEAL1Q15170 157 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ATG9AQ7Z3C6 839 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 AFAP1L1Q8TED9 768 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 DNAAF4Q8WXU2 420 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 LTV1Q96GA3 475 aaPredicted RBP4.65□□□□□ -1.67
USP16-205ENST00000474835 AGAP3Q96P47 875 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 HAPLN3Q96S86 360 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 SELENOOQ9BVL4 669 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 TMBIM4Q9HC24 238 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 CD248Q9HCU0 757 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 PLCB1Q9NQ66 1216 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ARHGEF3Q9NR81 526 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 FANCLQ9NW38 375 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 FAM184BQ9ULE4 1060 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 PHF24Q9UPV7 400 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 TRIM64BA6NI03 449 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 TRAFD1O14545 582 aaPredicted RBP4.65□□□□□ -1.67
USP16-205ENST00000474835 LSP1P33241 339 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ECM1Q16610 540 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 CWF19L1Q69YN2 538 aaKnown RBP4.65□□□□□ -1.67
USP16-205ENST00000474835 TMC6Q7Z403 805 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ANKS4BQ8N8V4 417 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ANKRD20A12PQ8NF67 263 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 CCDC34Q96HJ3 373 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 ACTR5Q9H9F9 607 aaPredicted RBP4.65□□□□□ -1.67
USP16-205ENST00000474835 C17orf75Q9HAS0 396 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 LRRC4CQ9HCJ2 640 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 STRN4Q9NRL3 753 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 HELLSQ9NRZ9 838 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 VPS18Q9P253 973 aa4.65□□□□□ -1.67
USP16-205ENST00000474835 TTF2Q9UNY4 1162 aaKnown RBP4.65□□□□□ -1.67
USP16-205ENST00000474835 SPATA31A1Q5TZJ5 1347 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 PTPDC1A2A3K4 754 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 SPDYE3A6NKU9 549 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ECE2O60344 883 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 RANBP6O60518 1105 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 BAG3O95817 575 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 PRPHP41219 470 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 PSMC4P43686 418 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 APBA1Q02410 837 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 KCNC4Q03721 635 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 WWC2Q6AWC2 1192 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 CYB5D1Q6P9G0 228 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 MCM10Q7L590 875 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 LRRC15Q8TF66 581 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ZNF473Q8WTR7 871 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 UTP4Q969X6 686 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 SEC62Q99442 399 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 ZNF510Q9Y2H8 683 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 STXBP5LQ9Y2K9 1186 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ABCB11O95342 1321 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 TCRBV5S4A2TA0A5A2 114 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 HMGB1P09429 215 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 QPCTQ16769 361 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 WASHC4Q2M389 1173 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 LONRF3Q496Y0 759 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 MIIPQ5JXC2 388 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 SLC9C2Q5TAH2 1124 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 DHX32Q7L7V1 743 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 ARL8AQ96BM9 186 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 INPP4AQ96PE3 977 aaPredicted RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 ZNF341Q9BYN7 854 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ANKIB1Q9P2G1 1089 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 HSFX1Q9UBD0 423 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 DBNLQ9UJU6 430 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 CAPN11Q9UMQ6 739 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 MYH14Q7Z406 1995 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 BTAF1O14981 1849 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 GOLGB1Q14789 3259 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 TEX33O43247 280 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 FOXO3O43524 673 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 KLRC4O43908 158 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 ATP6V1G2O95670 118 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 PTPN12Q05209 780 aaKnown RBP4.64□□□□□ -1.67
USP16-205ENST00000474835 CCDC15Q0P6D6 951 aa4.64□□□□□ -1.67
USP16-205ENST00000474835 EMBQ6PCB8 327 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms