RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
COPS6-208ENST00000474823 FEM1BQ9UK73 627 aa12.35□□□□□ -0.43
COPS6-208ENST00000474823 MYPNQ86TC9 1320 aa12.35□□□□□ -0.43
COPS6-208ENST00000474823 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
COPS6-208ENST00000474823 PRC1O43663 620 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
COPS6-208ENST00000474823 BCRP11274 1271 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 PSMA5P28066 241 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 DSG3P32926 999 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 WTAPQ15007 396 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 TMEM67Q5HYA8 995 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
COPS6-208ENST00000474823 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 GPRC5AQ8NFJ5 357 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 ANKS1AQ92625 1134 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 TMEM87BQ96K49 555 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
COPS6-208ENST00000474823 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
COPS6-208ENST00000474823 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 STAT2P52630 851 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 CCNA1P78396 465 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 LACTBP83111 547 aaPredicted RBP12.33□□□□□ -0.44
COPS6-208ENST00000474823 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 TMTC2Q8N394 836 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 PRPF38AQ8NAV1 312 aaKnown RBP12.33□□□□□ -0.44
COPS6-208ENST00000474823 CD99L2Q8TCZ2 262 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 KCNB2Q92953 911 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
COPS6-208ENST00000474823 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 MORF4L1Q9UBU8 362 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
COPS6-208ENST00000474823 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
COPS6-208ENST00000474823 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
COPS6-208ENST00000474823 PDHBP11177 359 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 FCGRTP55899 365 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 ANTXR2P58335 489 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 ERVK-24P63145 666 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 FGD1P98174 961 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 SEC23AQ15436 765 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 ADCK5Q3MIX3 580 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 BLOC1S2Q6QNY1 142 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 NFXL1Q6ZNB6 911 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
COPS6-208ENST00000474823 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 CWC22Q9HCG8 908 aaKnown RBP12.32□□□□□ -0.44
COPS6-208ENST00000474823 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
COPS6-208ENST00000474823 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 ZBED4O75132 1171 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 GNRH1P01148 92 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 HOXD10P28358 340 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 PSMC4P43686 418 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 PLS1Q14651 629 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
COPS6-208ENST00000474823 CTU1Q7Z7A3 348 aaKnown RBP12.31□□□□□ -0.44
COPS6-208ENST00000474823 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 IGDCC4Q8TDY8 1250 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 TXNRD2Q9NNW7 524 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
COPS6-208ENST00000474823 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
COPS6-208ENST00000474823 VWA5AO00534 786 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 SH2B2O14492 632 aaPredicted RBP12.3□□□□□ -0.44
COPS6-208ENST00000474823 TNPO2O14787 897 aaKnown RBP12.3□□□□□ -0.44
COPS6-208ENST00000474823 PLA2G6O60733 806 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
COPS6-208ENST00000474823 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 FDX1P10109 184 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 CASTP20810 708 aaKnown RBP12.3□□□□□ -0.44
COPS6-208ENST00000474823 MAPK4P31152 587 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 LIFRP42702 1097 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 Q3C1V9 767 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 COA7Q96BR5 231 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 SPATC1LQ9H0A9 340 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 LY9Q9HBG7 655 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 BTBD7Q9P203 1132 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 ADAMTS5Q9UNA0 930 aa12.3□□□□□ -0.44
COPS6-208ENST00000474823 PEX10O60683 326 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms