RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 WNT8BQ93098 351 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 ALKBH8Q96BT7 664 aaKnown RBP9.24□□□□□ -0.93
VPS50-211ENST00000474412 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
VPS50-211ENST00000474412 DNAJC25Q9H1X3 360 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 LIN7BQ9HAP6 207 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 SLX4Q8IY92 1834 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
VPS50-211ENST00000474412 IKBKEQ14164 716 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 SUZ12Q15022 739 aaKnown RBP9.23□□□□□ -0.93
VPS50-211ENST00000474412 ACAD11Q709F0 780 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 TP53INP1Q96A56 240 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 EHD4Q9H223 541 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 OSGEPQ9NPF4 335 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 TAF1P21675 1872 aa9.23□□□□□ -0.93
VPS50-211ENST00000474412 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
VPS50-211ENST00000474412 ADAM23O75077 832 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 ALX3O95076 343 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 RFC4P35249 363 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 TEFQ10587 303 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 VN1R5Q7Z5H4 357 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 AGGF1Q8N302 714 aaeCLIP9.22□□□□□ -0.93
VPS50-211ENST00000474412 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
VPS50-211ENST00000474412 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 ADCY9O60503 1353 aa9.22□□□□□ -0.93
VPS50-211ENST00000474412 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
VPS50-211ENST00000474412 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.94
VPS50-211ENST00000474412 GADD45BO75293 160 aaPredicted RBP9.21□□□□□ -0.94
VPS50-211ENST00000474412 CANXP27824 592 aaKnown RBP9.21□□□□□ -0.94
VPS50-211ENST00000474412 NLRP12P59046 1061 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 C19orf57Q0VDD7 668 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 RSPO4Q2I0M5 234 aaPredicted RBP9.21□□□□□ -0.94
VPS50-211ENST00000474412 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.21□□□□□ -0.94
VPS50-211ENST00000474412 CCNJLQ8IV13 435 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 TTC5Q8N0Z6 440 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 TMEM130Q8N3G9 435 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 CCDC74AQ96AQ1 378 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 PLEKHF1Q96S99 279 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 NUDCQ9Y266 331 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 CD2APQ9Y5K6 639 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 ATP10DQ9P241 1426 aa9.21□□□□□ -0.94
VPS50-211ENST00000474412 SPEF2Q9C093 1822 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 A0A096LPE4 126 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 A0A1W2PPZ6 126 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 WISP1O95388 367 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 GLB1P16278 677 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 KIAA0319Q5VV43 1072 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
VPS50-211ENST00000474412 FOXD4L4Q8WXT5 416 aaPredicted RBP9.2□□□□□ -0.94
VPS50-211ENST00000474412 MEGF10Q96KG7 1140 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 TCF12Q99081 682 aa9.2□□□□□ -0.94
VPS50-211ENST00000474412 BTBD11A6QL63 1104 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
VPS50-211ENST00000474412 ADAM11O75078 769 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 A1BGP04217 495 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 PLCB3Q01970 1234 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
VPS50-211ENST00000474412 MYBBP1AQ9BQG0 1328 aaKnown RBP9.19□□□□□ -0.94
VPS50-211ENST00000474412 A0A0G2JLW4 131 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 SOX1O00570 391 aaPredicted RBP9.18□□□□□ -0.94
VPS50-211ENST00000474412 TM4SF5O14894 197 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 ESRRAP11474 423 aaPredicted RBP9.18□□□□□ -0.94
VPS50-211ENST00000474412 DPEP1P16444 411 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 CHRNA5P30532 468 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 GRIA4P48058 902 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 NFIXQ14938 502 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 SPRED3Q2MJR0 410 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 NKAPLQ5M9Q1 402 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 HGSNATQ68CP4 663 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 CCDC146Q8IYE0 955 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 NLGN1Q8N2Q7 840 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
VPS50-211ENST00000474412 NARFQ9UHQ1 456 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
VPS50-211ENST00000474412 TREHO43280 583 aa9.17□□□□□ -0.94
VPS50-211ENST00000474412 HMGB2P26583 209 aaKnown RBP9.17□□□□□ -0.94
VPS50-211ENST00000474412 EIF5P55010 431 aaKnown RBP9.17□□□□□ -0.94
VPS50-211ENST00000474412 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
VPS50-211ENST00000474412 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
VPS50-211ENST00000474412 CLEC4MQ9H2X3 399 aaPredicted RBP9.17□□□□□ -0.94
VPS50-211ENST00000474412 MAPK8IP3Q9UPT6 1336 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 MYH3P11055 1940 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 PNMA6FA0A0J9YX94 578 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 DYRK3O43781 588 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 KCNA3P22001 575 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 TM4SF1P30408 202 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 DSC3Q14574 896 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 RALBP1Q15311 655 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 NFE2L2Q16236 605 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 TBC1D9BQ66K14 1250 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 KIAA1211Q6ZU35 1233 aa9.16□□□□□ -0.94
VPS50-211ENST00000474412 EPS8L3Q8TE67 593 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms