RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TTLL1O95922 423 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 TFRCP02786 760 aaKnown RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 TRIM32Q13049 653 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 PLS1Q14651 629 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 SHCBP1Q8NEM2 672 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 NUP88Q99567 741 aaPredicted RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 APBA2Q99767 749 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 MROH8Q9H579 483 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 HMX1Q9NP08 348 aaPredicted RBP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 INCENPQ9NQS7 918 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
CKS1B-206ENST00000474215 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
CKS1B-206ENST00000474215 BRCA2P51587 3418 aa13.27□□□□□ -0.28
CKS1B-206ENST00000474215 HIP1O00291 1037 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 VWA5AO00534 786 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 NDUFB10O96000 172 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 FGRP09769 529 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
CKS1B-206ENST00000474215 ERCC3P19447 782 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 PDE4AP27815 886 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 GRB14Q14449 540 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 TMEM132BQ14DG7 1078 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 CCL14Q16627 93 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 CRISPLD2Q9H0B8 497 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 PPP1R9AQ9ULJ8 1098 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.29
CKS1B-206ENST00000474215 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
CKS1B-206ENST00000474215 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 ORC4O43929 436 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 RANBP6O60518 1105 aaKnown RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 SLC25A27O95847 323 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 HOXC6P09630 235 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
CKS1B-206ENST00000474215 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 PLIN4Q96Q06 1357 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 SLF1Q9BQI6 1058 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
CKS1B-206ENST00000474215 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
CKS1B-206ENST00000474215 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 ZMYM6O95789 1325 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 STAT3P40763 770 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 LRRC47Q8N1G4 583 aaKnown RBP13.25□□□□□ -0.29
CKS1B-206ENST00000474215 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 RLFQ13129 1914 aa13.25□□□□□ -0.29
CKS1B-206ENST00000474215 NMT2O60551 498 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 FARP2O94887 1054 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-206ENST00000474215 FCER1AP12319 257 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 ADORA2AP29274 412 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 MFSD14CQ5VZR4 134 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 RIOX2Q8IUF8 465 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 TOMM22Q9NS69 142 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 SLC5A4Q9NY91 659 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 FLRT1Q9NZU1 646 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
CKS1B-206ENST00000474215 STX8Q9UNK0 236 aa13.24□□□□□ -0.29
CKS1B-206ENST00000474215 COBLO75128 1261 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 ZBED4O75132 1171 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
CKS1B-206ENST00000474215 BMP3P12645 472 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 NOVP48745 357 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 HAND2P61296 217 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
CKS1B-206ENST00000474215 AKNAD1Q5T1N1 836 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
CKS1B-206ENST00000474215 A0A0G2JMZ2 1700 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 ZNF213O14771 459 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 IGHA2P01877 340 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
CKS1B-206ENST00000474215 MCCP23508 829 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 CCND3P30281 292 aaPredicted RBP13.22□□□□□ -0.29
CKS1B-206ENST00000474215 COPB2P35606 906 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
CKS1B-206ENST00000474215 OLFML2BQ68BL8 750 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
CKS1B-206ENST00000474215 ANKLE1Q8NAG6 615 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms