RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PLCB3Q01970 1234 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 NFIXQ14938 502 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 HABP4Q5JVS0 413 aaKnown RBP3.48□□□□□ -1.85
CALD1-216ENST00000473714 ALKBH2Q6NS38 261 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 XKR5Q6UX68 686 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 PRRT2Q7Z6L0 340 aaPredicted RBP3.48□□□□□ -1.85
CALD1-216ENST00000473714 ABTB2Q8N961 1025 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 DDX54Q8TDD1 881 aaKnown RBP3.48□□□□□ -1.85
CALD1-216ENST00000473714 HELQQ8TDG4 1101 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 EDEM1Q92611 657 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 KCNN1Q92952 543 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 ASB16Q96NS5 453 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 CORO1BQ9BR76 489 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 GGNBP2Q9H3C7 697 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 PIDD1Q9HB75 910 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 LATS2Q9NRM7 1088 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 ADGRB3O60242 1522 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 DHX57Q6P158 1386 aaKnown RBP3.48□□□□□ -1.85
CALD1-216ENST00000473714 PIK3R4Q99570 1358 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 USP32Q8NFA0 1604 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 TROQ12816 1431 aaPredicted RBP3.47□□□□□ -1.85
CALD1-216ENST00000473714 METTL12A8MUP2 240 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 ETV2O00321 342 aaPredicted RBP3.47□□□□□ -1.85
CALD1-216ENST00000473714 EREGO14944 169 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 AOC2O75106 756 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 ITIH2P19823 946 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 GLDCP23378 1020 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 LINC00310P59036 64 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 ATP2B2Q01814 1243 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 PDE3BQ13370 1112 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 NOM1Q5C9Z4 860 aaKnown RBP3.47□□□□□ -1.85
CALD1-216ENST00000473714 NPAS4Q8IUM7 802 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 NLGN2Q8NFZ4 835 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 BHLHE41Q9C0J9 482 aaPredicted RBP3.47□□□□□ -1.85
CALD1-216ENST00000473714 EPB41L4BQ9H329 900 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 KIAA1522Q9P206 1035 aaPredicted RBP3.47□□□□□ -1.85
CALD1-216ENST00000473714 U3KQE9 123 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 NALCNQ8IZF0 1738 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 LRRIQ1Q96JM4 1722 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 MYO5BQ9ULV0 1848 aa3.47□□□□□ -1.85
CALD1-216ENST00000473714 KIAA1107Q9UPP5 1409 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 A0A0G2JLL6 359 aaPredicted RBP3.46□□□□□ -1.86
CALD1-216ENST00000473714 LOC105371045A0A1W2PR82 267 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 ECEL1O95672 775 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 PDGFAP04085 211 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 HMGB1P09429 215 aaKnown RBP3.46□□□□□ -1.86
CALD1-216ENST00000473714 MPSTP25325 297 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 LBX1P52954 281 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 DNM1Q05193 864 aaKnown RBP3.46□□□□□ -1.86
CALD1-216ENST00000473714 PCDH1Q08174 1060 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 PDE3AQ14432 1141 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 SLC15A2Q16348 729 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 C8orf34Q49A92 452 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 C16orf71Q8IYS4 520 aaPredicted RBP3.46□□□□□ -1.86
CALD1-216ENST00000473714 TNKS2Q9H2K2 1166 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 KCNK12Q9HB15 430 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 NRAPQ86VF7 1730 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 PLEKHG1Q9ULL1 1385 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 C1orf167Q5SNV9 1468 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 THSD7AQ9UPZ6 1657 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 RGPD3A6NKT7 1758 aaPredicted RBP3.46□□□□□ -1.86
CALD1-216ENST00000473714 RGPD4Q7Z3J3 1758 aa3.46□□□□□ -1.86
CALD1-216ENST00000473714 SYNGAP1Q96PV0 1343 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 NOS1P29475 1434 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 ADGRL3Q9HAR2 1447 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 TULP4Q9NRJ4 1543 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 ADAMTS20P59510 1910 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 LEFTY1O75610 366 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 LDHBP07195 334 aaKnown RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 ERCC5P28715 1186 aaPredicted RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 GDNFP39905 211 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 FXR1P51114 621 aaKnown RBP eCLIP3.45□□□□□ -1.86
CALD1-216ENST00000473714 ARHGAP4P98171 946 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 KRTAP1-1Q07627 177 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 PSMD2Q13200 908 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 ZNF423Q2M1K9 1284 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 PEAR1Q5VY43 1037 aaPredicted RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 ERICH6BQ5W0A0 696 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 SMYD4Q8IYR2 804 aaPredicted RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 TMEM87AQ8NBN3 555 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 DRC1Q96MC2 740 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 CITED4Q96RK1 184 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 ORAI2Q96SN7 254 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 DUSP23Q9BVJ7 150 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 CLEC4MQ9H2X3 399 aaPredicted RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 ATXN3LQ9H3M9 355 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 NMRK2Q9NPI5 230 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 STK32BQ9NY57 414 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 VTI1BQ9UEU0 232 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 FOXD3Q9UJU5 478 aaPredicted RBP3.45□□□□□ -1.86
CALD1-216ENST00000473714 PPP1R9AQ9ULJ8 1098 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 CUL9Q8IWT3 2517 aa3.45□□□□□ -1.86
CALD1-216ENST00000473714 CNTNAP4Q9C0A0 1308 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 CLIP1P30622 1438 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 TRPM2O94759 1503 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 PTPN23Q9H3S7 1636 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 RNGTTO60942 597 aaKnown RBP3.44□□□□□ -1.86
CALD1-216ENST00000473714 IGHA2P01877 340 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 SLFN14P0C7P3 912 aa3.44□□□□□ -1.86
CALD1-216ENST00000473714 EIF1AXP47813 144 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms