RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 FCGRTP55899 365 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 SART3Q15020 963 aaKnown RBP10.67□□□□□ -0.7
SMG5-203ENST00000473643 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 Q6ZUG5 572 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 CHST3Q7LGC8 479 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 NBPF11Q86T75 865 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 SNX21Q969T3 373 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 MKL1Q969V6 931 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 P2RX7Q99572 595 aaKnown RBP10.67□□□□□ -0.7
SMG5-203ENST00000473643 UBAC1Q9BSL1 405 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 TMOD4Q9NZQ9 345 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 DOCK1Q14185 1865 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 TNKSO95271 1327 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 PHIPQ8WWQ0 1821 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 ERICH2A1L162 156 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 MPHOSPH10O00566 681 aaKnown RBP10.66□□□□□ -0.7
SMG5-203ENST00000473643 ST18O60284 1047 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 NMT2O60551 498 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 AK2P54819 239 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 TOB2Q14106 344 aaPredicted RBP10.66□□□□□ -0.7
SMG5-203ENST00000473643 WTAPQ15007 396 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 SEPT2Q15019 361 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 FAM110CQ1W6H9 321 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 SLC9C1Q4G0N8 1177 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 TMEM67Q5HYA8 995 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 ANKRD13CQ8N6S4 541 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
SMG5-203ENST00000473643 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 CEP95Q96GE4 821 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 C12orf42Q96LP6 360 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 TCEANC2Q96MN5 208 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 KIAA1683Q9H0B3 1180 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 LY9Q9HBG7 655 aa10.66□□□□□ -0.7
SMG5-203ENST00000473643 KIAA0100Q14667 2235 aaKnown RBP10.65□□□□□ -0.7
SMG5-203ENST00000473643 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
SMG5-203ENST00000473643 TTLL1O95922 423 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.7
SMG5-203ENST00000473643 RCAN1P53805 252 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 USP14P54578 494 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 PRKCZQ05513 592 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 BRF1Q92994 677 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 LRRC2Q9BYS8 371 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
SMG5-203ENST00000473643 RBPJLQ9UBG7 517 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 MORF4L1Q9UBU8 362 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
SMG5-203ENST00000473643 MYPNQ86TC9 1320 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 TNRC18O15417 2968 aaPredicted RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 EEF2P13639 858 aaKnown RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 FLT3LGP49771 235 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 HERVK_113P62684 666 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 FGD1P98174 961 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 ICA1Q05084 483 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 CATSPERGQ6ZRH7 1159 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 RAET1EQ8TD07 263 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 ZNF274Q96GC6 653 aaPredicted RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 STX8Q9UNK0 236 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 LIMCH1Q9UPQ0 1083 aa10.64□□□□□ -0.71
SMG5-203ENST00000473643 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
SMG5-203ENST00000473643 PTPRFP10586 1907 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 TNPO2O14787 897 aaKnown RBP10.63□□□□□ -0.71
SMG5-203ENST00000473643 CD2BP2O95400 341 aaKnown RBP10.63□□□□□ -0.71
SMG5-203ENST00000473643 GRK4P32298 578 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 TROAPQ12815 778 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 IRF5Q13568 498 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 Q3C1V9 767 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 GPRC5AQ8NFJ5 357 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 PXYLP1Q8TE99 480 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 ZSCAN31Q96LW9 406 aaPredicted RBP10.63□□□□□ -0.71
SMG5-203ENST00000473643 MAP3K14Q99558 947 aa10.63□□□□□ -0.71
SMG5-203ENST00000473643 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms