RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 FAM155AB1AL88 458 aaPredicted RBP7.07□□□□□ -1.28
BBX-223ENST00000473542 LRIG2O94898 1065 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 CDK8P49336 464 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 SLBPQ14493 270 aaKnown RBP eCLIP7.07□□□□□ -1.28
BBX-223ENST00000473542 NKG7Q16617 165 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 INTS3Q68E01 1043 aaKnown RBP7.07□□□□□ -1.28
BBX-223ENST00000473542 LSRQ86X29 649 aaPredicted RBP7.07□□□□□ -1.28
BBX-223ENST00000473542 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 GMIPQ9P107 970 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
BBX-223ENST00000473542 ST14Q9Y5Y6 855 aa7.07□□□□□ -1.28
BBX-223ENST00000473542 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
BBX-223ENST00000473542 GRIN3BO60391 1043 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 GDNFP39905 211 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 FBXW10Q5XX13 1052 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 MFSD4AQ8N468 514 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 MIPEPQ99797 713 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 TRIM55Q9BYV6 548 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 TPX2Q9ULW0 747 aaKnown RBP7.06□□□□□ -1.28
BBX-223ENST00000473542 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
BBX-223ENST00000473542 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
BBX-223ENST00000473542 SFRP5Q5T4F7 317 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 CDCP2Q5VXM1 449 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 SIAH1Q8IUQ4 282 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 FAM169BQ8N8A8 192 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 KCT2Q8NC54 265 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 FBXO15Q8NCQ5 510 aaPredicted RBP7.05□□□□□ -1.28
BBX-223ENST00000473542 ZSWIM4Q9H7M6 989 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 ACTR10Q9NZ32 417 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 SLC12A7Q9Y666 1083 aa7.05□□□□□ -1.28
BBX-223ENST00000473542 NCANO14594 1321 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 NFIBO00712 420 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 PLCG1P19174 1290 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 CAP2P40123 477 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 ERVFC1P60507 584 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 C22orf34Q6ZV56 151 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 TTLL10Q6ZVT0 673 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 ZNF507Q8TCN5 953 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 CNNM2Q9H8M5 875 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 CORINQ9Y5Q5 1042 aa7.04□□□□□ -1.28
BBX-223ENST00000473542 SLC22A31A6NKX4 558 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 TNFRSF10CO14798 259 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 CBX7O95931 251 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 PGRP06401 933 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 GUCY2CP25092 1073 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 GRK4P32298 578 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 CCNFP41002 786 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 RALGPS1Q5JS13 557 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 HID1Q8IV36 788 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 MCATQ8IVS2 390 aaKnown RBP7.03□□□□□ -1.28
BBX-223ENST00000473542 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
BBX-223ENST00000473542 SLFN12Q8IYM2 578 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 HNRNPLLQ8WVV9 542 aaKnown RBP7.03□□□□□ -1.28
BBX-223ENST00000473542 UBE2FQ969M7 185 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 ALPK1Q96QP1 1244 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 CCDC113Q9H0I3 377 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 SLAMF8Q9P0V8 285 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
BBX-223ENST00000473542 MSRB2Q9Y3D2 182 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 CADPSQ9ULU8 1353 aa7.03□□□□□ -1.28
BBX-223ENST00000473542 DNAJC25-GNG10A0A024R161 153 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 PRRG2O14669 202 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 BUD31P41223 144 aaPredicted RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 ETF1P62495 437 aaKnown RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 FXNQ16595 210 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 SLC6A19Q695T7 634 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 OVOS1Q6IE37 1185 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 ZNF746Q6NUN9 644 aaPredicted RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 GIMAP6Q6P9H5 292 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 NLRC3Q7RTR2 1065 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 ATG4CQ96DT6 458 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 MRFAP1L1Q96HT8 127 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 PIF1Q9H611 641 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 CD320Q9NPF0 282 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 ZSWIM5Q9P217 1185 aa7.02□□□□□ -1.29
BBX-223ENST00000473542 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
BBX-223ENST00000473542 TLDC2A0PJX2 215 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 B8ZZF3 427 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 DDR2Q16832 855 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 LETMD1Q6P1Q0 360 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 ATG14Q6ZNE5 492 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 TTC6Q86TZ1 520 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 ACSF2Q96CM8 615 aaPredicted RBP7.01□□□□□ -1.29
BBX-223ENST00000473542 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
BBX-223ENST00000473542 DCP1AQ9NPI6 582 aaPredicted RBP7.01□□□□□ -1.29
BBX-223ENST00000473542 A0A1W2PQH9 124 aa7□□□□□ -1.29
BBX-223ENST00000473542 ETV2O00321 342 aaPredicted RBP7□□□□□ -1.29
BBX-223ENST00000473542 TNK2Q07912 1038 aa7□□□□□ -1.29
BBX-223ENST00000473542 RASA3Q14644 834 aa7□□□□□ -1.29
BBX-223ENST00000473542 KCNA10Q16322 511 aa7□□□□□ -1.29
BBX-223ENST00000473542 ABHD4Q8TB40 342 aa7□□□□□ -1.29
BBX-223ENST00000473542 TMEM87BQ96K49 555 aa7□□□□□ -1.29
BBX-223ENST00000473542 EPB41L4BQ9H329 900 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms