RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 TANGO6Q9C0B7 1094 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 PCNTO95613 3336 aa22.26■■□□□ 1.15
CTDSP1-207ENST00000473420 TBC1D8O95759 1140 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 BMP3P12645 472 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 SLC1A4P43007 532 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 GCLCP48506 637 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 LBX2Q6XYB7 198 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 SMCR8Q8TEV9 937 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 LY9Q9HBG7 655 aa22.25■■□□□ 1.15
CTDSP1-207ENST00000473420 PLA2G6O60733 806 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 PDHBP11177 359 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 HERVK_113P62684 666 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 COG2Q14746 738 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 P2RX7Q99572 595 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 ZSWIM6Q9HCJ5 1215 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 HOXC10Q9NYD6 342 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 FEM1BQ9UK73 627 aa22.24■■□□□ 1.15
CTDSP1-207ENST00000473420 COL11A1P12107 1806 aaPredicted RBP22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 FOXN1O15353 648 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 RPS6KB1P23443 525 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 C17orf99Q6UX52 265 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 RUFY3Q7L099 469 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 FBXL16Q8N461 479 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 NUP88Q99567 741 aaPredicted RBP22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 BACH2Q9BYV9 841 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 R3HDMLQ9H3Y0 253 aa22.23■■□□□ 1.15
CTDSP1-207ENST00000473420 SPDYE16A6NNV3 312 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 FLOT1O75955 427 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 DSG3P32926 999 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 CTCFP49711 727 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 FAM160B2Q86V87 743 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 SGMS1Q86VZ5 419 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 CYP46A1Q9Y6A2 500 aa22.22■■□□□ 1.15
CTDSP1-207ENST00000473420 GPR25O00155 361 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 HSPA8P11142 646 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 BCRP11274 1271 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 STAT2P52630 851 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 GPATCH4Q5T3I0 446 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 PRPF38AQ8NAV1 312 aaKnown RBP22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 CHURC1Q8WUH1 139 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 SLF1Q9BQI6 1058 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 LRRC2Q9BYS8 371 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 SENP2Q9HC62 589 aa22.21■■□□□ 1.15
CTDSP1-207ENST00000473420 MGAMO43451 1857 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 CCDC69A6NI79 296 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 TMEM232C9JQI7 657 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 DDAH1O94760 285 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 CPA1P15085 419 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 RBM25P49756 843 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 ZNF543Q08ER8 600 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 FAM110CQ1W6H9 321 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 CCDC96Q2M329 555 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 ASPRV1Q53RT3 343 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 RASGRP2Q7LDG7 609 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 CATIPQ7Z7H3 387 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 MAP3K14Q99558 947 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 AGXT2Q9BYV1 514 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 C22orf23Q9BZE7 217 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 GPHNQ9NQX3 736 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 MORF4L1Q9UBU8 362 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 CPA4Q9UI42 421 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 TSKSQ9UJT2 592 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 ADAMTS5Q9UNA0 930 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 MTMR7Q9Y216 660 aa22.2■■□□□ 1.14
CTDSP1-207ENST00000473420 FDX1P10109 184 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 TROAPQ12815 778 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 BTNL9Q6UXG8 535 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 NFXL1Q6ZNB6 911 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 KCTD1Q719H9 257 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 ZNF654Q8IZM8 581 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 TCEANC2Q96MN5 208 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 FBXO28Q9NVF7 368 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
CTDSP1-207ENST00000473420 PARP1P09874 1014 aaKnown RBP22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 FGD1P98174 961 aa22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 Q6ZUG5 572 aa22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 ATG4CQ96DT6 458 aa22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 RBPJLQ9UBG7 517 aa22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 ISY1Q9ULR0 285 aaKnown RBP22.18■■□□□ 1.14
CTDSP1-207ENST00000473420 FRMPD2Q68DX3 1309 aaPredicted RBP22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 FKTNO75072 461 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 CALM1P0DP23 149 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 CALM2P0DP24 149 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 CALM3P0DP25 149 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 SP3Q02447 781 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 GRM4Q14833 912 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 POTEEQ6S8J3 1075 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 ANKRD13CQ8N6S4 541 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 UPF3BQ9BZI7 483 aaKnown RBP22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 SLC12A7Q9Y666 1083 aa22.17■■□□□ 1.14
CTDSP1-207ENST00000473420 VWA5AO00534 786 aa22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 CNMDO75829 334 aa22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 RCAN1P53805 252 aa22.16■■□□□ 1.14
CTDSP1-207ENST00000473420 IKQ13123 557 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms