RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 MAP2K5Q13163 448 aa26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 FAM47AQ5JRC9 791 aa26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 SAMD1Q6SPF0 538 aaPredicted RBP26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 PAK6Q9NQU5 681 aaPredicted RBP26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 SYNPO2Q9UMS6 1093 aa26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 ZNF236Q9UL36 1845 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 ZMYM6O95789 1325 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 F5H6K3 240 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 SGPL1O95470 568 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 TTLL1O95922 423 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 ZKSCAN1P17029 563 aaPredicted RBP26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 MFAP1P55081 439 aaKnown RBP26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 KLRC3Q07444 240 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 TRIM32Q13049 653 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 SHCBP1Q8NEM2 672 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 MKL1Q969V6 931 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.77■■□□□ 1.886e-10■■■□□ 18.7
PTP4A1-203ENST00000473334 FBXO28Q9NVF7 368 aa26.77■■□□□ 1.88
PTP4A1-203ENST00000473334 NDUFB10O96000 172 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 FGAP02671 866 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 GRB14Q14449 540 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 PLS1Q14651 629 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 DEFB118Q96PH6 123 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 PPP1R9AQ9ULJ8 1098 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 ADAMTS5Q9UNA0 930 aa26.76■■□□□ 1.87
PTP4A1-203ENST00000473334 RPTORQ8N122 1335 aa26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 HIP1O00291 1037 aa26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 CAPN2P17655 700 aa26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 PDE4AP27815 886 aa26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 PRPF38BQ5VTL8 546 aaKnown RBP26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 NUP88Q99567 741 aaPredicted RBP26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 HMX1Q9NP08 348 aaPredicted RBP26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 DIAPH3Q9NSV4 1193 aa26.75■■□□□ 1.87
PTP4A1-203ENST00000473334 TSPY2A6NKD2 308 aa26.74■■□□□ 1.87
PTP4A1-203ENST00000473334 ERCC3P19447 782 aa26.74■■□□□ 1.87
PTP4A1-203ENST00000473334 CCL14Q16627 93 aa26.74■■□□□ 1.87
PTP4A1-203ENST00000473334 MAP3K21Q5TCX8 1036 aa26.74■■□□□ 1.87
PTP4A1-203ENST00000473334 LRRC47Q8N1G4 583 aaKnown RBP26.74■■□□□ 1.87
PTP4A1-203ENST00000473334 STRNO43815 780 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 ORC4O43929 436 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 TMEM132BQ14DG7 1078 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 PPP4R3BQ5MIZ7 849 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 GMCL1P1Q8NEA9 526 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 MROH8Q9H579 483 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 INCENPQ9NQS7 918 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 TACC3Q9Y6A5 838 aa26.73■■□□□ 1.87
PTP4A1-203ENST00000473334 VWA5AO00534 786 aa26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 HOXC6P09630 235 aa26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 FGRP09769 529 aa26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 PRKAR2AP13861 404 aaKnown RBP26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 CWC27Q6UX04 472 aaKnown RBP26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 NCAPG2Q86XI2 1143 aa26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 SLF1Q9BQI6 1058 aa26.72■■□□□ 1.87
PTP4A1-203ENST00000473334 SLC25A27O95847 323 aa26.71■■□□□ 1.87
PTP4A1-203ENST00000473334 TFRCP02786 760 aaKnown RBP26.71■■□□□ 1.87
PTP4A1-203ENST00000473334 UBE2Q1Q7Z7E8 422 aa26.71■■□□□ 1.87
PTP4A1-203ENST00000473334 CRISPLD2Q9H0B8 497 aa26.71■■□□□ 1.87
PTP4A1-203ENST00000473334 LAMA4Q16363 1823 aa26.7■■□□□ 1.87
PTP4A1-203ENST00000473334 RANBP6O60518 1105 aaKnown RBP26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 FARP2O94887 1054 aaPredicted RBP26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 ADORA2AP29274 412 aa26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 CACNB2Q08289 660 aaPredicted RBP26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 TTC22Q5TAA0 569 aa26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 REPS2Q8NFH8 660 aa26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 ZNF214Q9UL59 606 aaPredicted RBP26.7■■□□□ 1.86
PTP4A1-203ENST00000473334 GSPT1P15170 499 aaKnown RBP26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 SLFN13Q68D06 897 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 DPP9Q86TI2 863 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 RIOX2Q8IUF8 465 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 ABRAQ8N0Z2 381 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 PRPF38AQ8NAV1 312 aaKnown RBP26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 NPLOC4Q8TAT6 608 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 IL17RBQ9NRM6 502 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 TOMM22Q9NS69 142 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 FLRT1Q9NZU1 646 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 STX8Q9UNK0 236 aa26.69■■□□□ 1.86
PTP4A1-203ENST00000473334 STAT3P40763 770 aa26.68■■□□□ 1.86
PTP4A1-203ENST00000473334 HAND2P61296 217 aa26.68■■□□□ 1.86
PTP4A1-203ENST00000473334 MFSD14CQ5VZR4 134 aa26.68■■□□□ 1.86
PTP4A1-203ENST00000473334 FEM1BQ9UK73 627 aa26.68■■□□□ 1.86
PTP4A1-203ENST00000473334 NMT2O60551 498 aa26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 PCP11498 1178 aaKnown RBP26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 BMP3P12645 472 aa26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 COPB2P35606 906 aa26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 RRP12Q5JTH9 1297 aaKnown RBP26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 ZNFX1Q9P2E3 1918 aaKnown RBP26.67■■□□□ 1.86
PTP4A1-203ENST00000473334 FCER1AP12319 257 aa26.66■■□□□ 1.86
PTP4A1-203ENST00000473334 STAG1Q8WVM7 1258 aa26.66■■□□□ 1.86
PTP4A1-203ENST00000473334 GMCL1Q96IK5 515 aa26.66■■□□□ 1.86
PTP4A1-203ENST00000473334 NBPF3Q9H094 633 aa26.66■■□□□ 1.86
PTP4A1-203ENST00000473334 SLC5A4Q9NY91 659 aa26.66■■□□□ 1.86
PTP4A1-203ENST00000473334 NOVP48745 357 aa26.65■■□□□ 1.86
PTP4A1-203ENST00000473334 AKNAD1Q5T1N1 836 aa26.65■■□□□ 1.86
PTP4A1-203ENST00000473334 ANKLE1Q8NAG6 615 aa26.65■■□□□ 1.86
PTP4A1-203ENST00000473334 KIFC2Q96AC6 838 aa26.65■■□□□ 1.86
PTP4A1-203ENST00000473334 TEX13BQ9BXU2 312 aa26.65■■□□□ 1.86
PTP4A1-203ENST00000473334 COBLO75128 1261 aa26.64■■□□□ 1.86
PTP4A1-203ENST00000473334 ZBED4O75132 1171 aa26.64■■□□□ 1.86
PTP4A1-203ENST00000473334 CCND3P30281 292 aaPredicted RBP26.64■■□□□ 1.86
PTP4A1-203ENST00000473334 OLFML2BQ68BL8 750 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms