RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KMT5BQ4FZB7 885 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 TNNI3KQ59H18 835 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 CAVIN4Q5BKX8 364 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 METTL24Q5JXM2 366 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 TRIB2Q92519 343 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 FAM161BQ96MY7 647 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 OSBPL3Q9H4L5 887 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 PRM3Q9NNZ6 103 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 HMX1Q9NP08 348 aaPredicted RBP7.69□□□□□ -1.18
HDAC1-205ENST00000472928 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 FPGT-TNNI3KV9GXZ4 949 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 TTC41PQ6P2S7 1318 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 PLXNB2O15031 1838 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 TRIM75PA6NK02 468 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 ERC2O15083 957 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 CDC45O75419 566 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 PDE8BO95263 885 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 PRDX5P30044 214 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 PI4K2BQ8TCG2 481 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 EAF2Q96CJ1 260 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 FAM163AQ96GL9 167 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 CDX2Q99626 313 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 CCDC8Q9H0W5 538 aaPredicted RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 ECHDC1Q9NTX5 307 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
HDAC1-205ENST00000472928 DBNLQ9UJU6 430 aaKnown RBP7.68□□□□□ -1.18
HDAC1-205ENST00000472928 DOCK1Q14185 1865 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 HRO43593 1189 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 ACTN4O43707 911 aaKnown RBP7.67□□□□□ -1.18
HDAC1-205ENST00000472928 CTNND1O60716 968 aaKnown RBP7.67□□□□□ -1.18
HDAC1-205ENST00000472928 GPR37L1O60883 481 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
HDAC1-205ENST00000472928 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
HDAC1-205ENST00000472928 SDSP20132 328 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 ATP2B3Q16720 1220 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 ZNF697Q5TEC3 545 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 WDR66Q8TBY9 1149 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 DBNDD2Q9BQY9 259 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 IDI2Q9BXS1 227 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 GPR108Q9NPR9 543 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 DDX4Q9NQI0 724 aaKnown RBP7.67□□□□□ -1.18
HDAC1-205ENST00000472928 NDUFB9Q9Y6M9 179 aa7.67□□□□□ -1.18
HDAC1-205ENST00000472928 LAMA4Q16363 1823 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 A0A1B0GUL7 405 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 DDTLA6NHG4 134 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 PEX10O60683 326 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 ENTPD3O75355 529 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 CYP2B6P20813 491 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 ADORA1P30542 326 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 GCLCP48506 637 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 PUM3Q15397 648 aaKnown RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 MORN1Q5T089 497 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 CASC1Q6TDU7 716 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 LRRN4Q8WUT4 740 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 RILPL2Q969X0 211 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 NEUROD6Q96NK8 337 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 ASCC2Q9H1I8 757 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 TTYH1Q9H313 450 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 SEMA6BQ9H3T3 888 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.66□□□□□ -1.18
HDAC1-205ENST00000472928 MORF4L1Q9UBU8 362 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 AKAP2Q9Y2D5 859 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 GAKO14976 1311 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 LOC285556D6RIA3 1793 aa7.66□□□□□ -1.18
HDAC1-205ENST00000472928 POM121CA8CG34 1229 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 IFIT1P09914 478 aaKnown RBP7.65□□□□□ -1.18
HDAC1-205ENST00000472928 XRCC5P13010 732 aaKnown RBP7.65□□□□□ -1.18
HDAC1-205ENST00000472928 SLC5A1P13866 664 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 CCND3P30281 292 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-205ENST00000472928 CACNB2Q08289 660 aaPredicted RBP7.65□□□□□ -1.18
HDAC1-205ENST00000472928 RRP1BQ14684 758 aaKnown RBP7.65□□□□□ -1.18
HDAC1-205ENST00000472928 GORABQ5T7V8 394 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 MYLIPQ8WY64 445 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 TSC1Q92574 1164 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 USP6NLQ92738 828 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 SALL1Q9NSC2 1324 aa7.65□□□□□ -1.18
HDAC1-205ENST00000472928 FAM196BA6NMK8 535 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 LDHBP07195 334 aaKnown RBP7.64□□□□□ -1.19
HDAC1-205ENST00000472928 ATP5JP18859 108 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 HMGCS2P54868 508 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 TIMM10P62072 90 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 SPP2Q13103 211 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 CCL14Q16627 93 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
HDAC1-205ENST00000472928 TTC39AQ5SRH9 613 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 C9orf50Q5SZB4 431 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 ZSCAN29Q8IWY8 852 aaPredicted RBP7.64□□□□□ -1.19
HDAC1-205ENST00000472928 ZNF280CQ8ND82 737 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 PRR7Q8TB68 274 aa7.64□□□□□ -1.19
HDAC1-205ENST00000472928 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms