RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 COL6A1P12109 1028 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 MX1P20591 662 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 ADORA2AP29274 412 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 TMEM132BQ14DG7 1078 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 IFNL3Q8IZI9 196 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 SEC62Q99442 399 aaKnown RBP18.28■□□□□ 0.52
VTI1A-203ENST00000472892 NYAP2Q9P242 653 aa18.28■□□□□ 0.52
VTI1A-203ENST00000472892 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 COBLO75128 1261 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 CYP2C19P33261 490 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 TDO2P48775 406 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 PLS1Q14651 629 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 ZMYM1Q5SVZ6 1142 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 OLFML2BQ68BL8 750 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 ZNF287Q9HBT7 754 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 FBXO28Q9NVF7 368 aa18.27■□□□□ 0.52
VTI1A-203ENST00000472892 PFASO15067 1338 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 VWA5AO00534 786 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 SLC25A27O95847 323 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
VTI1A-203ENST00000472892 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 NCAPG2Q86XI2 1143 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
VTI1A-203ENST00000472892 TRPV1Q8NER1 839 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 MKL1Q969V6 931 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 NACAP1Q9BZK3 213 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
VTI1A-203ENST00000472892 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
VTI1A-203ENST00000472892 RANBP2P49792 3224 aaKnown RBP18.26■□□□□ 0.51
VTI1A-203ENST00000472892 F5H6K3 240 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 MSCO60682 206 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 KLRC3Q07444 240 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 FAM83BQ5T0W9 1011 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 STAP2Q9UGK3 403 aa18.25■□□□□ 0.51
VTI1A-203ENST00000472892 GREB1LQ9C091 1923 aaPredicted RBP18.24■□□□□ 0.51
VTI1A-203ENST00000472892 RAD21O60216 631 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 PRDM1O75626 825 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 FCER1AP12319 257 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 CYBAP13498 195 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 CNGA1P29973 690 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 STAT3P40763 770 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 C7orf61Q8IZ16 206 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 REPS2Q8NFH8 660 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
VTI1A-203ENST00000472892 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
VTI1A-203ENST00000472892 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 TRIOBPQ9H2D6 2365 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 A0A1W2PPC1 479 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 NDUFB10O96000 172 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
VTI1A-203ENST00000472892 SYNPO2Q9UMS6 1093 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
VTI1A-203ENST00000472892 PARP14Q460N5 1801 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 PDE4BQ07343 736 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 AAMPQ13685 434 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 NEDD1Q8NHV4 660 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 EVI5LQ96CN4 794 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 CEP95Q96GE4 821 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 MAML3Q96JK9 1138 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
VTI1A-203ENST00000472892 GDF15Q99988 308 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 SLF1Q9BQI6 1058 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 NAPBQ9H115 298 aa18.22■□□□□ 0.51
VTI1A-203ENST00000472892 FOXP2O15409 715 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 SLC3A2P08195 630 aaKnown RBP18.21■□□□□ 0.51
VTI1A-203ENST00000472892 BMP8BP34820 402 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 COPB2P35606 906 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 PDE1AP54750 535 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 PPARAQ07869 468 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 PRPF38AQ8NAV1 312 aaKnown RBP18.21■□□□□ 0.51
VTI1A-203ENST00000472892 MMP19Q99542 508 aa18.21■□□□□ 0.51
VTI1A-203ENST00000472892 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
VTI1A-203ENST00000472892 DIS3Q9Y2L1 958 aaKnown RBP18.21■□□□□ 0.51
VTI1A-203ENST00000472892 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 DNM1LO00429 736 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 SEPT4O43236 478 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 TTLL1O95922 423 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 KCTD2Q14681 263 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 LRRC26Q2I0M4 334 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 ZNF792Q3KQV3 632 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 TICAM2Q86XR7 235 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 GMCL1P1Q8NEA9 526 aa18.2■□□□□ 0.5
VTI1A-203ENST00000472892 PGK2P07205 417 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 TSPY3P0CV98 308 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 TSPY8P0CW00 308 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 TFAP4Q01664 338 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 FAM47AQ5JRC9 791 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 PRAMEF19Q5SWL8 479 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 ARRDC4Q8NCT1 418 aa18.19■□□□□ 0.5
VTI1A-203ENST00000472892 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
VTI1A-203ENST00000472892 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms