RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 TTBK2Q6IQ55 1244 aa31.76■■■□□ 2.67
HOXB3-207ENST00000472863 KCTD1Q719H9 257 aa31.76■■■□□ 2.67
HOXB3-207ENST00000472863 RBM27Q9P2N5 1060 aaKnown RBP31.76■■■□□ 2.67
HOXB3-207ENST00000472863 CCDC96Q2M329 555 aa31.75■■■□□ 2.67
HOXB3-207ENST00000472863 BTBD18B2RXH4 712 aa31.75■■■□□ 2.67
HOXB3-207ENST00000472863 XBP1P17861 261 aa31.75■■■□□ 2.67
HOXB3-207ENST00000472863 PTMSP20962 102 aa31.75■■■□□ 2.67
HOXB3-207ENST00000472863 SMARCA1P28370 1054 aa31.75■■■□□ 2.67
HOXB3-207ENST00000472863 DLK2Q6UY11 383 aa31.74■■■□□ 2.67
HOXB3-207ENST00000472863 CCDC84Q86UT8 332 aaPredicted RBP31.74■■■□□ 2.67
HOXB3-207ENST00000472863 PHF20Q9BVI0 1012 aa31.74■■■□□ 2.67
HOXB3-207ENST00000472863 RIOX1Q9H6W3 641 aa31.74■■■□□ 2.67
HOXB3-207ENST00000472863 FZD1Q9UP38 647 aa31.74■■■□□ 2.67
HOXB3-207ENST00000472863 U2AF2P26368 475 aaKnown RBP eCLIP31.73■■■□□ 2.672e-6■□□□□ 10.7
HOXB3-207ENST00000472863 SLC1A4P43007 532 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 BRAPQ7Z569 592 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 DIS3L2Q8IYB7 885 aaKnown RBP31.73■■■□□ 2.67
HOXB3-207ENST00000472863 TMEM87AQ8NBN3 555 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 GMCL1P1Q8NEA9 526 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 GPKOWQ92917 476 aaPredicted RBP eCLIP31.73■■■□□ 2.679e-6■■□□□ 14.5
HOXB3-207ENST00000472863 FTOQ9C0B1 505 aaKnown RBP eCLIP31.73■■■□□ 2.67
HOXB3-207ENST00000472863 PITPNM2Q9BZ72 1349 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 ZC3H4Q9UPT8 1303 aaKnown RBP31.73■■■□□ 2.67
HOXB3-207ENST00000472863 ASNSP08243 561 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 SLC16A2P36021 539 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 GNL2Q13823 731 aaKnown RBP31.73■■■□□ 2.67
HOXB3-207ENST00000472863 GPATCH4Q5T3I0 446 aaKnown RBP31.73■■■□□ 2.67
HOXB3-207ENST00000472863 HOMER1Q86YM7 354 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 OXER1Q8TDS5 423 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 ARHGEF10LQ9HCE6 1279 aa31.73■■■□□ 2.67
HOXB3-207ENST00000472863 GADD45BO75293 160 aaPredicted RBP31.72■■■□□ 2.67
HOXB3-207ENST00000472863 NDUFB10O96000 172 aa31.72■■■□□ 2.67
HOXB3-207ENST00000472863 CEBPZQ03701 1054 aaKnown RBP31.72■■■□□ 2.67
HOXB3-207ENST00000472863 SAFBQ15424 915 aaKnown RBP eCLIP31.72■■■□□ 2.67
HOXB3-207ENST00000472863 DCAF4Q8WV16 495 aa31.72■■■□□ 2.67
HOXB3-207ENST00000472863 PIGSQ96S52 555 aa31.72■■■□□ 2.67
HOXB3-207ENST00000472863 ISY1Q9ULR0 285 aaKnown RBP31.72■■■□□ 2.67
HOXB3-207ENST00000472863 INPP5BP32019 993 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 DCAF15Q66K64 600 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 NUP88Q99567 741 aaPredicted RBP31.71■■■□□ 2.67
HOXB3-207ENST00000472863 GLIS2Q9BZE0 524 aaPredicted RBP31.71■■■□□ 2.67
HOXB3-207ENST00000472863 TMX2Q9Y320 296 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 PPP2R3BQ9Y5P8 575 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 MYH15Q9Y2K3 1946 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 EPHX2P34913 555 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 DCPSQ96C86 337 aaKnown RBP31.71■■■□□ 2.67
HOXB3-207ENST00000472863 RRP36Q96EU6 259 aaKnown RBP31.71■■■□□ 2.67
HOXB3-207ENST00000472863 USP28Q96RU2 1077 aa31.71■■■□□ 2.67
HOXB3-207ENST00000472863 CTNND1O60716 968 aaKnown RBP31.7■■■□□ 2.67
HOXB3-207ENST00000472863 NR5A1Q13285 461 aa31.7■■■□□ 2.67
HOXB3-207ENST00000472863 KIAA1755Q5JYT7 1200 aa31.7■■■□□ 2.67
HOXB3-207ENST00000472863 MYSM1Q5VVJ2 828 aa31.7■■■□□ 2.67
HOXB3-207ENST00000472863 SPICE1Q8N0Z3 855 aa31.7■■■□□ 2.67
HOXB3-207ENST00000472863 ZNF341Q9BYN7 854 aa31.7■■■□□ 2.67
HOXB3-207ENST00000472863 NPY5RQ15761 445 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 WWC2Q6AWC2 1192 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 TYW1BQ6NUM6 668 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 ADGRF4Q8IZF3 695 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 CFAP45Q9UL16 551 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 DDX49Q9Y6V7 483 aaKnown RBP31.69■■■□□ 2.66
HOXB3-207ENST00000472863 HEATR3Q7Z4Q2 680 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 HOOK2Q96ED9 719 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 SPATA32Q96LK8 384 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 ZNF396Q96N95 335 aaPredicted RBP31.69■■■□□ 2.66
HOXB3-207ENST00000472863 SCAND2PQ9GZW5 306 aaPredicted RBP31.69■■■□□ 2.66
HOXB3-207ENST00000472863 FOXP1Q9H334 677 aaPredicted RBP31.69■■■□□ 2.66
HOXB3-207ENST00000472863 SYNPO2Q9UMS6 1093 aa31.69■■■□□ 2.66
HOXB3-207ENST00000472863 TPRNQ4KMQ1 711 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 USP50Q70EL3 339 aaPredicted RBP31.68■■■□□ 2.66
HOXB3-207ENST00000472863 NOSTRINQ8IVI9 506 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 GPT2Q8TD30 523 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 LEO1Q8WVC0 666 aaPredicted RBP31.68■■■□□ 2.66
HOXB3-207ENST00000472863 GMCL1Q96IK5 515 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 JMJD4Q9H9V9 463 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 ATAD5Q96QE3 1844 aa31.68■■■□□ 2.66
HOXB3-207ENST00000472863 ADM5C9JUS6 153 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 NLRP5P59047 1200 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 SKOR2Q2VWA4 1001 aaPredicted RBP31.67■■■□□ 2.66
HOXB3-207ENST00000472863 ZNF112Q9UJU3 913 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 POTECB2RU33 542 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 SULF1Q8IWU6 871 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 SH3GLB2Q9NR46 395 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 BARHL2Q9NY43 387 aa31.67■■■□□ 2.66
HOXB3-207ENST00000472863 SEC63Q9UGP8 760 aaKnown RBP31.67■■■□□ 2.66
HOXB3-207ENST00000472863 USP17L10C9JJH3 530 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 STXBP3O00186 592 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 ADAMTS3O15072 1205 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 ZYXQ15942 572 aaKnown RBP31.66■■■□□ 2.66
HOXB3-207ENST00000472863 CSPP1Q1MSJ5 1256 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 SUPT20HL1Q3ZLR7 823 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 ATL3Q6DD88 541 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 ZKSCAN4Q969J2 545 aaPredicted RBP31.66■■■□□ 2.66
HOXB3-207ENST00000472863 WRNIP1Q96S55 665 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 SSC5DA1L4H1 1573 aa31.66■■■□□ 2.66
HOXB3-207ENST00000472863 KRT2P35908 639 aa31.65■■■□□ 2.66
HOXB3-207ENST00000472863 BMP3P12645 472 aa31.65■■■□□ 2.66
HOXB3-207ENST00000472863 GOPCQ9HD26 462 aa31.65■■■□□ 2.66
HOXB3-207ENST00000472863 CLIC4Q9Y696 253 aa31.65■■■□□ 2.66
HOXB3-207ENST00000472863 PRKG1Q13976 671 aa31.64■■■□□ 2.66
HOXB3-207ENST00000472863 KRT26Q7Z3Y9 468 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms