RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 USP42Q9H9J4 1324 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 PCNTO95613 3336 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 GYS1P13807 737 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 FBLN1P23142 703 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 ITPKAP23677 461 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 FAAP100Q0VG06 881 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 ITPK1Q13572 414 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 GRM2Q14416 872 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 DUOXA2Q1HG44 320 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 PRPF40BQ6NWY9 871 aaKnown RBP4.71□□□□□ -1.66
XRN1-209ENST00000472625 ARHGAP27Q6ZUM4 889 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 SMC1BQ8NDV3 1235 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 BSNDQ8WZ55 320 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 ASB16Q96NS5 453 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 TRIM56Q9BRZ2 755 aaKnown RBP4.71□□□□□ -1.66
XRN1-209ENST00000472625 SEC31BQ9NQW1 1179 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 RNF19AQ9NV58 838 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 KNSTRNQ9Y448 316 aa4.71□□□□□ -1.66
XRN1-209ENST00000472625 MRC1P22897 1456 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 A0A087WZG4 1122 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 A0A096LPE4 126 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 A0A1W2PPZ6 126 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 ECEL1O95672 775 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 AKAP4Q5JQC9 854 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 SOGA3Q5TF21 947 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 FAM117BQ6P1L5 589 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 MORC1Q86VD1 984 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 TTC5Q8N0Z6 440 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 UTP4Q969X6 686 aaKnown RBP4.7□□□□□ -1.66
XRN1-209ENST00000472625 POLR3GLQ9BT43 218 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 ZNF576Q9H609 170 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 RNF112Q9ULX5 631 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 RAXQ9Y2V3 346 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 RGPD2P0DJD1 1756 aa4.7□□□□□ -1.66
XRN1-209ENST00000472625 KDM6AO15550 1401 aaPredicted RBP4.7□□□□□ -1.66
XRN1-209ENST00000472625 MAP2P11137 1827 aaKnown RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 ITGB4P16144 1822 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 KIF13BQ9NQT8 1826 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 COL15A1P39059 1388 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 A0A0G2JLW4 131 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 FAM177BA6PVY3 158 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 MED26O95402 600 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 STARD3NLO95772 234 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 TGFB1P01137 390 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 DPEP1P16444 411 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 LMNB1P20700 586 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 MAPK1P28482 360 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 TNNT2P45379 298 aaPredicted RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 CRKLP46109 303 aaKnown RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 PREPP48147 710 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 C9orf131Q5VYM1 1079 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 AMIGO3Q86WK7 504 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 KLHL23Q8NBE8 558 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 C3orf58Q8NDZ4 430 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 TTC16Q8NEE8 873 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 ASAP3Q8TDY4 903 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 WNT8BQ93098 351 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 TEX13AQ9BXU3 409 aaPredicted RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 SOX17Q9H6I2 414 aaPredicted RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 LIN7BQ9HAP6 207 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 OSGEPQ9NPF4 335 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 PCMTD2Q9NV79 361 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 RNF181Q9P0P0 153 aa4.69□□□□□ -1.66
XRN1-209ENST00000472625 BIN2Q9UBW5 565 aaPredicted RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 TNRC6CQ9HCJ0 1690 aaKnown RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 COL5A3P25940 1745 aaPredicted RBP4.69□□□□□ -1.66
XRN1-209ENST00000472625 CARMIL3Q8ND23 1372 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 HMX2A2RU54 273 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 H0YIN7 160 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 NPHP1O15259 732 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 B3GALT4O96024 378 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 P4HBP07237 508 aaKnown RBP4.68□□□□□ -1.66
XRN1-209ENST00000472625 PDE6BP35913 854 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 SULT6B1Q6IMI4 303 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 SND1Q7KZF4 910 aaKnown RBP eCLIP4.68□□□□□ -1.66
XRN1-209ENST00000472625 TRIM42Q8IWZ5 723 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 C7orf69Q9H7B7 122 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 PANK3Q9H999 370 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 SLC52A2Q9HAB3 445 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 STOML1Q9UBI4 398 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 NARFQ9UHQ1 456 aa4.68□□□□□ -1.66
XRN1-209ENST00000472625 SOS1Q07889 1333 aaPredicted RBP4.68□□□□□ -1.66
XRN1-209ENST00000472625 PNMA6FA0A0J9YX94 578 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 LOC100289279A0A1B0GTE1 492 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 IQCA1LA6NCM1 817 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 POLRMTO00411 1230 aaKnown RBP4.67□□□□□ -1.66
XRN1-209ENST00000472625 DHX15O43143 795 aaKnown RBP4.67□□□□□ -1.66
XRN1-209ENST00000472625 IGLV1-40P01703 118 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 VEGFAP15692 232 aaPredicted RBP4.67□□□□□ -1.66
XRN1-209ENST00000472625 ST5P78524 1137 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 TEFQ10587 303 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 NPAS4Q8IUM7 802 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 TTLL6Q8N841 843 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 JMYQ8N9B5 988 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 FAM46AQ96IP4 442 aaKnown RBP4.67□□□□□ -1.66
XRN1-209ENST00000472625 RUSC1Q9BVN2 902 aa4.67□□□□□ -1.66
XRN1-209ENST00000472625 USP26Q9BXU7 913 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms