RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 MSCO60682 206 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 TTF1Q15361 905 aaPredicted RBP12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 FAM83BQ5T0W9 1011 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 TTYH1Q9H313 450 aaPredicted RBP12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 VCPKMTQ9H867 229 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 XPNPEP3Q9NQH7 507 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 PAG1Q9NWQ8 432 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 SLC4A4Q9Y6R1 1079 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 IGHA2P01877 340 aa12.18□□□□□ -0.46
SCAMP3-205ENST00000472397 FCER1AP12319 257 aa12.18□□□□□ -0.46
SCAMP3-205ENST00000472397 ADD2P35612 726 aa12.18□□□□□ -0.46
SCAMP3-205ENST00000472397 MROH8Q9H579 483 aa12.18□□□□□ -0.46
SCAMP3-205ENST00000472397 TMX2Q9Y320 296 aa12.18□□□□□ -0.46
SCAMP3-205ENST00000472397 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 LTBP2Q14767 1821 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 MYADML2A6NDP7 307 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 STRNO43815 780 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 CERS3Q8IU89 383 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 SHCBP1Q8NEM2 672 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 ZHX1Q9UKY1 873 aaPredicted RBP12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 RIPK3Q9Y572 518 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 DNAH12Q6ZR08 3092 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 RLFQ13129 1914 aa12.17□□□□□ -0.46
SCAMP3-205ENST00000472397 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 GRXCR1A8MXD5 290 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 RARBP10826 455 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 FOSL2P15408 326 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 PTGS1P23219 599 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 STAT3P40763 770 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 RNPC3Q96LT9 517 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 PRDM6Q9NQX0 595 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 ISY1Q9ULR0 285 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
SCAMP3-205ENST00000472397 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 VWA5AO00534 786 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 WDR46O15213 610 aaKnown RBP12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 PRDM1O75626 825 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 CLTBP09497 229 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 RAG1P15918 1043 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 KCTD2Q14681 263 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 ZNF792Q3KQV3 632 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 HSP90AB4PQ58FF6 505 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 VTI1AQ96AJ9 217 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 RAVER2Q9HCJ3 691 aaKnown RBP12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
SCAMP3-205ENST00000472397 COL11A1P12107 1806 aaPredicted RBP12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 RBAK-RBAKDNI3L0D1 243 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 IGSF3O75054 1194 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 SNAP25P60880 206 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 SNX17Q15036 470 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 C16orf86Q6ZW13 317 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 RNF180Q86T96 592 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 USP38Q8NB14 1042 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
SCAMP3-205ENST00000472397 ADCY6O43306 1168 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 SLC25A27O95847 323 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 ACRP10323 421 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 ATP5JP18859 108 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 PBX2P40425 430 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 GRIN2CQ14957 1233 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 KCNA10Q16322 511 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 C20orf194Q5TEA3 1177 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 RIOX2Q8IUF8 465 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 AMOTL1Q8IY63 956 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 LRRC47Q8N1G4 583 aaKnown RBP12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 REPS2Q8NFH8 660 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 HAUS7Q99871 368 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
SCAMP3-205ENST00000472397 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms