RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 PRPF38BQ5VTL8 546 aaKnown RBP10.99□□□□□ -0.65
SMC4-213ENST00000472282 FOXP4Q8IVH2 680 aaPredicted RBP10.99□□□□□ -0.65
SMC4-213ENST00000472282 ANKRD13CQ8N6S4 541 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 SHISA4Q96DD7 197 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
SMC4-213ENST00000472282 FSD1Q9BTV5 496 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMC4-213ENST00000472282 ZNF532Q9HCE3 1301 aa10.99□□□□□ -0.65
SMC4-213ENST00000472282 BRCA2P51587 3418 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 RLFQ13129 1914 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
SMC4-213ENST00000472282 OATP04181 439 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 GRK4P32298 578 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 FCGRTP55899 365 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 MTMR2Q13614 643 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
SMC4-213ENST00000472282 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
SMC4-213ENST00000472282 RAET1EQ8TD07 263 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 SMCR8Q8TEV9 937 aaPredicted RBP10.98□□□□□ -0.65
SMC4-213ENST00000472282 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 FRMPD3Q5JV73 1810 aa10.98□□□□□ -0.65
SMC4-213ENST00000472282 ASNSP08243 561 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 ELNP15502 786 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 USP5P45974 858 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 FLT3LGP49771 235 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 PLCD1P51178 756 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 TTC22Q5TAA0 569 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 TMED8Q6PL24 325 aaPredicted RBP10.97□□□□□ -0.65
SMC4-213ENST00000472282 EVI5LQ96CN4 794 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 WDR18Q9BV38 432 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 ASCC2Q9H1I8 757 aaPredicted RBP10.97□□□□□ -0.65
SMC4-213ENST00000472282 AS3MTQ9HBK9 375 aa10.97□□□□□ -0.65
SMC4-213ENST00000472282 COL11A1P12107 1806 aaPredicted RBP10.97□□□□□ -0.65
SMC4-213ENST00000472282 LAMA4Q16363 1823 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 SMIM22K7EJ46 135 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
SMC4-213ENST00000472282 GH2P01242 217 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 HLA-DOAP06340 250 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 CFHP08603 1231 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 GSPT1P15170 499 aaKnown RBP10.96□□□□□ -0.65
SMC4-213ENST00000472282 HOXD10P28358 340 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 BACE1P56817 501 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 SMYD5Q6GMV2 418 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 TATDN1Q6P1N9 297 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 LCORLQ8N3X6 602 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 SDR42E1Q8WUS8 393 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 RILPL2Q969X0 211 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.65
SMC4-213ENST00000472282 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 MAGEB6P1A0A0J9YX57 407 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 ADCY3O60266 1144 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 MBD4O95243 580 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 CYP2D6P10635 497 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 CCL5P13501 91 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 SHMT1P34896 483 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 FAM110CQ1W6H9 321 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 APPBP2Q92624 585 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 P2RX7Q99572 595 aaKnown RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 UNC93B1Q9H1C4 597 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 EHD4Q9H223 541 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 TXNRD2Q9NNW7 524 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 SERPINB13Q9UIV8 391 aa10.95□□□□□ -0.66
SMC4-213ENST00000472282 GREB1LQ9C091 1923 aaPredicted RBP10.95□□□□□ -0.66
SMC4-213ENST00000472282 ZNFX1Q9P2E3 1918 aaKnown RBP10.94□□□□□ -0.66
SMC4-213ENST00000472282 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 PRKAB2O43741 272 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 NR1I2O75469 434 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 GUCY1A2P33402 732 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 SLC19A1P41440 591 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 GABPAQ06546 454 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
SMC4-213ENST00000472282 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 SLC44A5Q8NCS7 719 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 ACER1Q8TDN7 264 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 OSBP2Q969R2 916 aa10.94□□□□□ -0.66
SMC4-213ENST00000472282 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 C19orf81C9J6K1 198 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 M0R2C6 588 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 INHAP05111 366 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 SDSP20132 328 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 HOXA7P31268 230 aaPredicted RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
SMC4-213ENST00000472282 TRIM32Q13049 653 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 IRF5Q13568 498 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 HIC1Q14526 733 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 Q3C1V9 767 aa10.93□□□□□ -0.66
SMC4-213ENST00000472282 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms