RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZNF165P49910 485 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 PCBP3P57721 371 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 LRRFIP1Q32MZ4 808 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 SEZ6Q53EL9 994 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 NBPF12Q5TAG4 269 aaPredicted RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 CIAPIN1Q6FI81 312 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 ZNF605Q86T29 641 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 CILP2Q8IUL8 1156 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 ZNF655Q8N720 491 aaPredicted RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 EHMT1Q9H9B1 1298 aa6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 YBX2Q9Y2T7 364 aaKnown RBP6.13□□□□□ -1.43
PRPF40A-207ENST00000471701 CLEC3AO75596 197 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 UBOX5O94941 541 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 CCNFP41002 786 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 NBPF9Q3BBW0 867 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 TIGD5Q53EQ6 642 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 CDCP2Q5VXM1 449 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 GK5Q6ZS86 529 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 WAPLQ7Z5K2 1190 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 REXO1Q8N1G1 1221 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 NKD1Q969G9 470 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 INTS4Q96HW7 963 aaKnown RBP6.12□□□□□ -1.43
PRPF40A-207ENST00000471701 PSPNO60542 156 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 PEX10O60683 326 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 C1QL4Q86Z23 238 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 SIRT2Q8IXJ6 389 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 TMEM87AQ8NBN3 555 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 FOXP3Q9BZS1 431 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 ZNF552Q9H707 407 aaPredicted RBP6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 CNNM2Q9H8M5 875 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 UBP1Q9NZI7 540 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 TCFL5Q9UL49 500 aa6.11□□□□□ -1.43
PRPF40A-207ENST00000471701 NUAK1O60285 661 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 CLCQ05315 142 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 OVOS1Q6IE37 1185 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 NLRC3Q7RTR2 1065 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 TMC3Q7Z5M5 1100 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 AMIGO3Q86WK7 504 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 CD320Q9NPF0 282 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 EBF1Q9UH73 591 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 ADAMTS1Q9UHI8 967 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 FBXL21Q9UKT6 434 aa6.1□□□□□ -1.43
PRPF40A-207ENST00000471701 OR14I1A6ND48 311 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 SYPP08247 313 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 POLR2BP30876 1174 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 KIR2DL1P43626 348 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 CRKP46108 304 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 DLG4P78352 724 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 MRPL58Q14197 206 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 LCNL1Q6ZST4 164 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 CEP128Q6ZU80 1094 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 NT5C1AQ9BXI3 368 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 MCOLN1Q9GZU1 580 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 ZNF281Q9Y2X9 895 aa6.09□□□□□ -1.43
PRPF40A-207ENST00000471701 TEX51A0A1B0GUA7 166 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 FKTNO75072 461 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 SEMA7AO75326 666 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 LINC00310P59036 64 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 MAP6Q96JE9 813 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 ZNF512BQ96KM6 892 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 DHRS1Q96LJ7 313 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 MKRN2Q9H000 416 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
PRPF40A-207ENST00000471701 MYOCOSA0A1B0GUC4 107 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 SIGLEC6O43699 453 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 NRDCO43847 1150 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 USP2O75604 605 aaPredicted RBP6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 PRAMEF1O95521 474 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 ENDOUP21128 410 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 GALK1P51570 392 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 SNW1Q13573 536 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 ADGRF1Q5T601 910 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 KIAA0825Q8IV33 1275 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 SLITRK4Q8IW52 837 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 SHISA4Q96DD7 197 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 SPON2Q9BUD6 331 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 G6PC3Q9BUM1 346 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 CRTAC1Q9NQ79 661 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 CNOT6Q9ULM6 557 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
PRPF40A-207ENST00000471701 RTP1P59025 263 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 ZNF385BQ569K4 471 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 ANTXR1Q9H6X2 564 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 SIRT5Q9NXA8 310 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 TNFRSF10DQ9UBN6 386 aa6.06□□□□□ -1.44
PRPF40A-207ENST00000471701 MEIS1O00470 390 aa6.05□□□□□ -1.44
PRPF40A-207ENST00000471701 PNLIPP16233 465 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms