RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 IPO9Q96P70 1041 aaKnown RBP22.37■■□□□ 1.17
PSPC1-203ENST00000471658 MAP3K14Q99558 947 aa22.37■■□□□ 1.17
PSPC1-203ENST00000471658 GOPCQ9HD26 462 aa22.37■■□□□ 1.17
PSPC1-203ENST00000471658 SYNPO2Q9UMS6 1093 aa22.37■■□□□ 1.17
PSPC1-203ENST00000471658 JAK2O60674 1132 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 SLC1A4P43007 532 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 ZNF543Q08ER8 600 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 MKRN3Q13064 507 aaKnown RBP22.36■■□□□ 1.17
PSPC1-203ENST00000471658 NTRK3Q16288 839 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 CCDC96Q2M329 555 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 SLC35G1Q2M3R5 365 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 SAPCD2Q86UD0 394 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 SRBD1Q8N5C6 995 aaKnown RBP22.36■■□□□ 1.17
PSPC1-203ENST00000471658 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 GMCL1Q96IK5 515 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 UBA5Q9GZZ9 404 aa22.36■■□□□ 1.17
PSPC1-203ENST00000471658 ISY1Q9ULR0 285 aaKnown RBP22.36■■□□□ 1.17
PSPC1-203ENST00000471658 PPIL2Q13356 520 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 KLRF2D3W0D1 207 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 CPLX1O14810 134 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 BMP3P12645 472 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 TMTC3Q6ZXV5 915 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 NSUN7Q8NE18 718 aaKnown RBP22.35■■□□□ 1.17
PSPC1-203ENST00000471658 PHKBQ93100 1093 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 WNK4Q96J92 1243 aa22.35■■□□□ 1.17
PSPC1-203ENST00000471658 RBM28Q9NW13 759 aaKnown RBP22.35■■□□□ 1.17
PSPC1-203ENST00000471658 TMEM88BA6NKF7 163 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 KIF5BP33176 963 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 SLC16A2P36021 539 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 USP14P54578 494 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 FUT2Q10981 343 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 TLL2Q9Y6L7 1015 aa22.34■■□□□ 1.17
PSPC1-203ENST00000471658 CCDC196A0A1B0GTZ2 297 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 C19orf81C9J6K1 198 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 ASPRV1Q53RT3 343 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 SH3D19Q5HYK7 790 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 KCNH4Q9UQ05 1017 aa22.33■■□□□ 1.17
PSPC1-203ENST00000471658 hCG_1642624A0A1W2PR95 340 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 CXCL11O14625 94 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 CYTH3O43739 400 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 HSP90AA1P07900 732 aaKnown RBP22.32■■□□□ 1.16
PSPC1-203ENST00000471658 VCAM1P19320 739 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 PPP2R5BQ15173 497 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 PIBF1Q8WXW3 757 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 VAT1LQ9HCJ6 419 aa22.32■■□□□ 1.16
PSPC1-203ENST00000471658 ABT1Q9ULW3 272 aaKnown RBP22.32■■□□□ 1.16
PSPC1-203ENST00000471658 PTPDC1A2A3K4 754 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 DHX16O60231 1041 aaKnown RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 IFNAR1P17181 557 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 ZNF157P51786 506 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 C12orf42Q96LP6 360 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 TMOD4Q9NZQ9 345 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 DAXXQ9UER7 740 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 A0A0G2JLL6 359 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 FDPSP14324 419 aaKnown RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 GNAQP50148 359 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 RGMBQ6NW40 437 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 GADL1Q6ZQY3 521 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 PRRT2Q7Z6L0 340 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 SMARCC2Q8TAQ2 1214 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 LPAR1Q92633 364 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 INTS4Q96HW7 963 aaKnown RBP22.31■■□□□ 1.16
PSPC1-203ENST00000471658 SLC26A6Q9BXS9 759 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 FBXO28Q9NVF7 368 aa22.31■■□□□ 1.16
PSPC1-203ENST00000471658 WDR46O15213 610 aaKnown RBP22.3■■□□□ 1.16
PSPC1-203ENST00000471658 MOGSQ13724 837 aa22.3■■□□□ 1.16
PSPC1-203ENST00000471658 CPLX2Q6PUV4 134 aaKnown RBP22.3■■□□□ 1.16
PSPC1-203ENST00000471658 RASAL3Q86YV0 1011 aa22.3■■□□□ 1.16
PSPC1-203ENST00000471658 LLPHQ9BRT6 129 aaKnown RBP22.3■■□□□ 1.16
PSPC1-203ENST00000471658 RPAP3Q9H6T3 665 aaPredicted RBP22.3■■□□□ 1.16
PSPC1-203ENST00000471658 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
PSPC1-203ENST00000471658 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.3■■□□□ 1.16
PSPC1-203ENST00000471658 CNTNAP5Q8WYK1 1306 aa22.3■■□□□ 1.16
PSPC1-203ENST00000471658 GJB2P29033 226 aa22.29■■□□□ 1.16
PSPC1-203ENST00000471658 TREML2Q5T2D2 321 aa22.29■■□□□ 1.16
PSPC1-203ENST00000471658 SAMD1Q6SPF0 538 aaPredicted RBP22.29■■□□□ 1.16
PSPC1-203ENST00000471658 V9GY48 417 aaPredicted RBP22.29■■□□□ 1.16
PSPC1-203ENST00000471658 FMNL1O95466 1100 aaPredicted RBP22.28■■□□□ 1.16
PSPC1-203ENST00000471658 SNAP25P60880 206 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 SSRP1Q08945 709 aaKnown RBP22.28■■□□□ 1.16
PSPC1-203ENST00000471658 IKQ13123 557 aaPredicted RBP22.28■■□□□ 1.16
PSPC1-203ENST00000471658 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 MS4A4AQ96JQ5 239 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 LZTS2Q9BRK4 669 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 TANGO6Q9C0B7 1094 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 ORC3Q9UBD5 711 aaPredicted RBP22.28■■□□□ 1.16
PSPC1-203ENST00000471658 SNAPC2Q13487 334 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 RIOX1Q9H6W3 641 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 JMJD4Q9H9V9 463 aa22.28■■□□□ 1.16
PSPC1-203ENST00000471658 BAZ2BQ9UIF8 2168 aaKnown RBP22.27■■□□□ 1.16
PSPC1-203ENST00000471658 PTPRFP10586 1907 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 CDKL5O76039 1030 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 SYDE2Q5VT97 1194 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
PSPC1-203ENST00000471658 KIFC2Q96AC6 838 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms