RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 RAD50Q92878 1312 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
LINC00888-202ENST00000471496 VCAM1P19320 739 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 CTGFP29279 349 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 PDE4BQ07343 736 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 MFSD10Q14728 455 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 CTU1Q7Z7A3 348 aaKnown RBP14.71□□□□□ -0.05
LINC00888-202ENST00000471496 TNS4Q8IZW8 715 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 KANSL2Q9H9L4 492 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 DOCK3Q8IZD9 2030 aa14.71□□□□□ -0.05
LINC00888-202ENST00000471496 SGSM2O43147 1006 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 ORC4O43929 436 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 USP14P54578 494 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 HAND2P61296 217 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 ZNF444Q8N0Y2 327 aaPredicted RBP14.7□□□□□ -0.06
LINC00888-202ENST00000471496 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 ARHGAP39Q9C0H5 1083 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 MCOLN1Q9GZU1 580 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
LINC00888-202ENST00000471496 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
LINC00888-202ENST00000471496 CENPFP49454 3210 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 LACTBP83111 547 aaPredicted RBP14.69□□□□□ -0.06
LINC00888-202ENST00000471496 TFAP4Q01664 338 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 PTH1RQ03431 593 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 PABPC4Q13310 644 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC00888-202ENST00000471496 OTOP1Q7RTM1 612 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 TBC1D10CQ8IV04 446 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 ERO1AQ96HE7 468 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 P2RX7Q99572 595 aaKnown RBP14.69□□□□□ -0.06
LINC00888-202ENST00000471496 ARHGEF10LQ9HCE6 1279 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 NYAP2Q9P242 653 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 PNMA3Q9UL41 463 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 OSBPP22059 807 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 CATSPERGQ6ZRH7 1159 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 RUFY2Q8WXA3 655 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 VCPKMTQ9H867 229 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 IL17RBQ9NRM6 502 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
LINC00888-202ENST00000471496 COL11A1P12107 1806 aaPredicted RBP14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L15C9J2P7 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L13C9JLJ4 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L11C9JVI0 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L18D6R9N7 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L22D6RA61 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L17D6RBQ6 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L19D6RCP7 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L20D6RJB6 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 PEX10O60683 326 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 NOVP48745 357 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 HERVK_113P62684 666 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 USP17L24Q0WX57 530 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 SMCR8Q8TEV9 937 aaPredicted RBP14.68□□□□□ -0.06
LINC00888-202ENST00000471496 STAG1Q8WVM7 1258 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 MKL1Q969V6 931 aa14.68□□□□□ -0.06
LINC00888-202ENST00000471496 RPAP3Q9H6T3 665 aaPredicted RBP14.68□□□□□ -0.06
LINC00888-202ENST00000471496 PLXNB2O15031 1838 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 NMT2O60551 498 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 GCLCP48506 637 aaPredicted RBP14.67□□□□□ -0.06
LINC00888-202ENST00000471496 IRX3P78415 501 aaPredicted RBP14.67□□□□□ -0.06
LINC00888-202ENST00000471496 ATP2B2Q01814 1243 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 FAM110CQ1W6H9 321 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 SPRYD3Q8NCJ5 442 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 LPAR1Q92633 364 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 TRIM47Q96LD4 638 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 SH2D4AQ9H788 454 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 RBPJLQ9UBG7 517 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 MORF4L1Q9UBU8 362 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 TRIM17Q9Y577 477 aa14.67□□□□□ -0.06
LINC00888-202ENST00000471496 NEDD4P46934 1319 aa14.66□□□□□ -0.06
LINC00888-202ENST00000471496 ZNF213O14771 459 aa14.66□□□□□ -0.06
LINC00888-202ENST00000471496 ESYT1Q9BSJ8 1104 aa14.66□□□□□ -0.06
LINC00888-202ENST00000471496 EFCC1Q9HA90 598 aa14.66□□□□□ -0.06
LINC00888-202ENST00000471496 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
LINC00888-202ENST00000471496 TSPY2A6NKD2 308 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 F5H6K3 240 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.06
LINC00888-202ENST00000471496 CNMDO75829 334 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 TTLL1O95922 423 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 PCP11498 1178 aaKnown RBP14.65□□□□□ -0.06
LINC00888-202ENST00000471496 PSMC4P43686 418 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 LSM11P83369 360 aaKnown RBP eCLIP14.65□□□□□ -0.06
LINC00888-202ENST00000471496 KLRC3Q07444 240 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 PKN2Q16513 984 aaKnown RBP14.65□□□□□ -0.06
LINC00888-202ENST00000471496 PPP4R3BQ5MIZ7 849 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 LBX2Q6XYB7 198 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 MAP4K1Q92918 833 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 ABHD8Q96I13 439 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 CTNNA3Q9UI47 895 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 SYNPO2Q9UMS6 1093 aa14.65□□□□□ -0.06
LINC00888-202ENST00000471496 TAF6LQ9Y6J9 622 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms