RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MROH8Q9H579 483 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 CERS4Q9HA82 394 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 PIH1D3Q9NQM4 214 aaKnown RBP8.38□□□□□ -1.07
HDAC1-204ENST00000471488 MUC3AQ02505 3323 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 TLR3O15455 904 aaKnown RBP8.37□□□□□ -1.07
HDAC1-204ENST00000471488 GNAI3P08754 354 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 CYP2C18P33260 490 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 PPP4CP60510 307 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 AAK1Q2M2I8 961 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 TMEM31Q5JXX7 168 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 TATDN1Q6P1N9 297 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 PSRC1Q6PGN9 363 aaPredicted RBP8.37□□□□□ -1.07
HDAC1-204ENST00000471488 NOL8Q76FK4 1167 aaKnown RBP8.37□□□□□ -1.07
HDAC1-204ENST00000471488 METTL16Q86W50 562 aaKnown RBP8.37□□□□□ -1.07
HDAC1-204ENST00000471488 CLEC10AQ8IUN9 316 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 LRFN3Q9BTN0 628 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 API5Q9BZZ5 524 aaKnown RBP8.37□□□□□ -1.07
HDAC1-204ENST00000471488 EPHX3Q9H6B9 360 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 SPC25Q9HBM1 224 aa8.37□□□□□ -1.07
HDAC1-204ENST00000471488 SYNRGQ9UMZ2 1314 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 A0A1W2PRG0 241 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MYADML2A6NDP7 307 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 E9PSI1 815 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 RFXAPO00287 272 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 GTPBP6O43824 516 aaPredicted RBP8.36□□□□□ -1.07
HDAC1-204ENST00000471488 FGBP02675 491 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MYOGP15173 224 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 DSG3P32926 999 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 SHMT1P34896 483 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 PLCD1P51178 756 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 CCL23P55773 120 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 IRX5P78411 483 aaPredicted RBP8.36□□□□□ -1.07
HDAC1-204ENST00000471488 C16orf59Q7L2K0 433 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 SHCBP1Q8NEM2 672 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MCM9Q9NXL9 1143 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
HDAC1-204ENST00000471488 FAM184BQ9ULE4 1060 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 YBX2Q9Y2T7 364 aaKnown RBP8.36□□□□□ -1.07
HDAC1-204ENST00000471488 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MYH1P12882 1939 aa8.36□□□□□ -1.07
HDAC1-204ENST00000471488 MROH7Q68CQ1 1323 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 ASGR1P07306 291 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 BMP1P13497 986 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 GUCY1A2P33402 732 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 EVX2Q03828 476 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 TMEM132BQ14DG7 1078 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 ALDH1L2Q3SY69 923 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 TNNI3KQ59H18 835 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 GNASQ5JWF2 1037 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 KIAA1755Q5JYT7 1200 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 ANKRD33Q7Z3H0 272 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 ABRAQ8N0Z2 381 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 CCDC8Q9H0W5 538 aaPredicted RBP8.35□□□□□ -1.07
HDAC1-204ENST00000471488 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
HDAC1-204ENST00000471488 FPGT-TNNI3KV9GXZ4 949 aa8.35□□□□□ -1.07
HDAC1-204ENST00000471488 MAGEB6P1A0A0J9YX57 407 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 PNMA6EA0A0J9YXQ4 647 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-204ENST00000471488 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 ADAMTS4O75173 837 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 SLC25A27O95847 323 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 GNAI2P04899 355 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 ZNF865P0CJ78 1059 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-204ENST00000471488 CYP2D6P10635 497 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 ICA1Q05084 483 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 KRT40Q6A162 431 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 FRAT1Q92837 279 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-204ENST00000471488 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
HDAC1-204ENST00000471488 EHD4Q9H223 541 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 HIPK3Q9H422 1215 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 IL23AQ9NPF7 189 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 TBX21Q9UL17 535 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 SLC4A7Q9Y6M7 1214 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 SMCHD1A6NHR9 2005 aa8.34□□□□□ -1.07
HDAC1-204ENST00000471488 MYO9BQ13459 2157 aa8.34□□□□□ -1.08
HDAC1-204ENST00000471488 FOCADQ5VW36 1801 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 ZNF236Q9UL36 1845 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 UMODL1Q5DID0 1318 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 ARVCFO00192 962 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 ZBTB22O15209 634 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 SURF6O75683 361 aaKnown RBP8.33□□□□□ -1.08
HDAC1-204ENST00000471488 IGHA2P01877 340 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 STAT3P40763 770 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 BEX3Q00994 111 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 ZNF792Q3KQV3 632 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 TMEM179Q6ZVK1 233 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 DEFB128Q7Z7B8 93 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 CPXCR1Q8N123 301 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 PCSK9Q8NBP7 692 aaKnown RBP8.33□□□□□ -1.08
HDAC1-204ENST00000471488 SDR42E1Q8WUS8 393 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 ARNTL2Q8WYA1 636 aa8.33□□□□□ -1.08
HDAC1-204ENST00000471488 CLUAP1Q96AJ1 413 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms