RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 KLRG1Q96E93 195 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 DSCC1Q9BVC3 393 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ZCCHC2Q9C0B9 1178 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 SAP130Q9H0E3 1048 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ANTXR1Q9H6X2 564 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 HMG20BQ9P0W2 317 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ANKIB1Q9P2G1 1089 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 RBM8AQ9Y5S9 174 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF804BA4D1E1 1349 aa7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 PDS5AQ29RF7 1337 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-204ENST00000471297 AK9Q5TCS8 1911 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 K7ELQ4 463 aaPredicted RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 BRD1O95696 1058 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 PSMA5P28066 241 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 HIBADHP31937 336 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 ADD2P35612 726 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 NFX1Q12986 1120 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 KRT32Q14532 448 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 C11orf91Q3C1V1 193 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 C16orf46Q6P387 395 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 SP8Q8IXZ3 490 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 GPR161Q8N6U8 529 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 GTPBP3Q969Y2 492 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 MASTLQ96GX5 879 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 MYO19Q96H55 970 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 FAM84BQ96KN1 310 aaPredicted RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 SUSD3Q96L08 255 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 TM6SF1Q9BZW5 370 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 TMX4Q9H1E5 349 aaPredicted RBP7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 KLK14Q9P0G3 267 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 CTNNA3Q9UI47 895 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 SNX14Q9Y5W7 946 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 XDHP47989 1333 aa7.25□□□□□ -1.25
SMNDC1-204ENST00000471297 SNAP23O00161 211 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 FRAT2O75474 233 aaPredicted RBP7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 SRGNP10124 158 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 GYG1P46976 350 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 NEK4P51957 841 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 DGKZQ13574 1117 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 RASGRF1Q13972 1273 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 UBAP2LQ14157 1087 aaKnown RBP7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 SLC9C2Q5TAH2 1124 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 CREB3L3Q68CJ9 461 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 STYK1Q6J9G0 422 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 FOXR1Q6PIV2 292 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF589Q86UQ0 364 aaPredicted RBP7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 HOMEZQ8IX15 550 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF280CQ8ND82 737 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 OSBP2Q969R2 916 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 SEC62Q99442 399 aaKnown RBP7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 PIH1D3Q9NQM4 214 aaKnown RBP7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 GGA1Q9UJY5 639 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 PALD1Q9ULE6 856 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
SMNDC1-204ENST00000471297 SLC27A2O14975 620 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 IDH1O75874 414 aaKnown RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 WFS1O76024 890 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 HSPD1P10809 573 aaKnown RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 PDE6AP16499 860 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 GPSM2P81274 684 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 HIF1AQ16665 826 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 FIGNL1Q6PIW4 674 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 PI16Q6UXB8 463 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 CCDC129Q6ZRS4 1044 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF804AQ7Z570 1209 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 DEFB132Q7Z7B7 95 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 ZGPATQ8N5A5 531 aaKnown RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 GTF3C2Q8WUA4 911 aaPredicted RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 IRF7Q92985 503 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 HSH2DQ96JZ2 352 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 ALDH8A1Q9H2A2 487 aaPredicted RBP7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 MTMR7Q9Y216 660 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 ATP6V0A2Q9Y487 856 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 PCDHGC4Q9Y5F7 938 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 MAST3O60307 1309 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 ZNF532Q9HCE3 1301 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 IRS2Q9Y4H2 1338 aa7.23□□□□□ -1.25
SMNDC1-204ENST00000471297 RPAP1Q9BWH6 1393 aaPredicted RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 NRXN2Q9P2S2 1712 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 TCRBV5S4A2TA0A5A2 114 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 H0YIN7 160 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 M0R2C6 588 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 GPR25O00155 361 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 ATXN7O15265 892 aaPredicted RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 BNIP3LO60238 219 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 HSP90AA1P07900 732 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 HMGB1P09429 215 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 GNAT2P19087 354 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 BRD2P25440 801 aaKnown RBP7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 ALX1Q15699 326 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 VPS53Q5VIR6 699 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
SMNDC1-204ENST00000471297 C2CD5Q86YS7 1000 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms